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Thermobifida fusca YX (tfus0)
Gene : AAZ56041.1
DDBJ      :             putative secreted glycosyl hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  29/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
:240 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->240 2zuxA PDBj 4e-75 58.4 %
:HMM:PFM   172->219 PF00041 * fn3 0.00078 18.8 48/85  
:BLT:SWISS 1->240 YESW_BACSU 1e-74 58.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56041.1 GT:GENE AAZ56041.1 GT:PRODUCT putative secreted glycosyl hydrolase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2346348..2347070) GB:FROM 2346348 GB:TO 2347070 GB:DIRECTION - GB:PRODUCT putative secreted glycosyl hydrolase GB:PROTEIN_ID AAZ56041.1 GB:DB_XREF GI:71916139 LENGTH 240 SQ:AASEQ MFGAMAVDDDGRGMWTTGYGHGDALHVGDFVPARPGLEVYGVSESSSQPNAWLADARTGSTLWRTASGDDNGRGVAGDIWAGSPGAEFWSSRVDGLLNTSGTAIGRKPSSINFLVWWDGDPSRELLDQTRIDKYGPNGDTRLLTGSGVASNNGTKATPSLSGDILGDWREEVIWRTSDNSALRIYASPHPTELRIPTLMHDTQYRVAIAWQNTAYNQPPHPSFPIGDGMAPPPWPDIYYP GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 1->240|YESW_BACSU|1e-74|58.4|238/620| BL:PDB:NREP 1 BL:PDB:REP 1->240|2zuxA|4e-75|58.4|238/582| HM:PFM:NREP 1 HM:PFM:REP 172->219|PF00041|0.00078|18.8|48/85|fn3| OP:NHOMO 45 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------1-1-121---------1--11-2-------------------13---------1----1-------------------------------------1----------------------------------------------------------------1222-2-----------------3------------------------------------------------------------------------------------------1--------------2-------1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------1-1- -------------------1--------------------------------1111----------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 239 STR:RPRED 99.6 SQ:SECSTR EETTEEEcTTccEEEEccccccccEEEEcccTTccccEEEEEcccTccccEEEEETTTccEEEEEccccccccEEEEcccTTccccEEEET#ETEEEcTTccccccccccccEEEccccccccEEEETTEEEEEETTTEEEEEEcTTEEcccGGGccccEEEccccccccEEEEEETTccEEEEEccccccccccccGGGcTTHHHHHHHTTccccccccccccccTTccccccccEEcc PSIPRED cEEEEEEcccccEEEEcccccccEEEEccccccccccEEEEEEccccccHHHHcccccccEEEEEccccccccEEEEEEcccccccEEEEcccccEEEccccEEEccccccEEEEEEccccEEEHHHcccccccccccccEEEEEcccccccccccccEEEEEccccccEEEEEEcccccEEEEEEcccccccEEEHHHccHHHHEEEEEEccccccccccccEEccccccccccccccc //