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Thermobifida fusca YX (tfus0)
Gene : AAZ56058.1
DDBJ      :             putative transporter membrane protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  350/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
:337 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   78->282 PF03741 * TerC 3e-18 33.3 %
:HMM:PFM   75->283 PF03741 * TerC 9.5e-56 33.3 183/184  
:HMM:PFM   252->318 PF05656 * DUF805 0.00039 25.4 67/120  
:BLT:SWISS 40->290 Y2742_MYCBO 5e-63 48.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56058.1 GT:GENE AAZ56058.1 GT:PRODUCT putative transporter membrane protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2368910..2369923) GB:FROM 2368910 GB:TO 2369923 GB:DIRECTION - GB:PRODUCT putative transporter membrane protein GB:PROTEIN_ID AAZ56058.1 GB:DB_XREF GI:71916156 LENGTH 337 SQ:AASEQ MDAPWWVWLATIVGIAVILVVDLAIVDRPWSKKREPKEFSLKEASWWSAFYIALAIVFGIGIWYFAGWEKAGEYFAGYVTEKSLSVDNLFVFYLILTSFAVPKKYQHEVLLVGIMLALVMRGVFIAVGAQAVNAWSEVFYLFGAFLIYTAIKIVRDNVAGSEEEETNYTDSFAVRMLRKVWPVTDSYHGPRLTVKLDGRRHITPMFMVIVAVGVTDLIFAVDSIPAIFGLTQDAYLVFTANAFALLGLRVLYFLLAGLMDRLAYISWGLAAIMVFIGIKMLLHALHENGVDVPEVGTSLSLGVILGVMTITVIASVVKSRSDMRKLQARAGDITPRE GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 40->290|Y2742_MYCBO|5e-63|48.8|250/397| TM:NTM 9 TM:REGION 7->29| TM:REGION 46->68| TM:REGION 81->102| TM:REGION 108->130| TM:REGION 137->159| TM:REGION 205->227| TM:REGION 237->259| TM:REGION 263->285| TM:REGION 297->318| SEG 12->27|ivgiavilvvdlaivd| RP:PFM:NREP 1 RP:PFM:REP 78->282|PF03741|3e-18|33.3|174/178|TerC| HM:PFM:NREP 2 HM:PFM:REP 75->283|PF03741|9.5e-56|33.3|183/184|TerC| HM:PFM:REP 252->318|PF05656|0.00039|25.4|67/120|DUF805| GO:PFM:NREP 1 GO:PFM GO:0016021|"GO:integral to membrane"|PF03741|IPR005496| OP:NHOMO 466 OP:NHOMOORG 374 OP:PATTERN ------------------------------------------------1---------------1--- 111-11111111111--11-12--1111111-3333222211111211133133322111341131312311111111----1----------------1-1111-11-1--------------1-----------222--11121--------------------1----------------1------1--------------------------------11------------------------------------------------------------------------------------------------------2-------1-12-11---------1---------------------1---112--------11-----1------------1-11111111--1-1111---11---1--1-------------------------12------------1111111111111------1-1-1-------------------------1----1------2-111--------11-1-111111111---11-1-----11---11111122121-223122-1----------------------------111--------11111--11111-21-1----11---11----12111211231111211-2111111111211111111122111111111111111111111111111111-111111111111--1------1111---1-------------1--1111111-1-2111111-1-12122-111----------2111111111111111111111111111------1111-----------------------------------------------2- ------1-----------------------------------------------------------------------------------------------------5-----------------------------------------------------------------11111B212111121-1111----3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 160-169, 318-337| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccccccEEEEcccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccc //