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Thermobifida fusca YX (tfus0)
Gene : AAZ56076.1
DDBJ      :             tyrosyl-tRNA synthetase
Swiss-Prot:SYY_THEFY    RecName: Full=Tyrosyl-tRNA synthetase;         EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase;         Short=TyrRS;

Homologs  Archaea  0/68 : Bacteria  906/915 : Eukaryota  178/199 : Viruses  0/175   --->[See Alignment]
c.26.1d.66.1
:447 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->444 2janA PDBj e-106 53.5 %
:RPS:PDB   7->342 2akeA PDBj 2e-51 16.6 %
:RPS:PDB   361->428 3bbnD PDBj 2e-04 16.7 %
:RPS:SCOP  19->343 1jiiA  c.26.1.1 * e-109 45.4 %
:RPS:SCOP  345->440 1jh3A  d.66.1.4 * 1e-11 37.0 %
:HMM:SCOP  16->347 1jilA_ c.26.1.1 * 6.6e-100 46.3 %
:HMM:SCOP  346->447 1jh3A_ d.66.1.4 * 2.1e-18 36.4 %
:RPS:PFM   46->292 PF00579 * tRNA-synt_1b 1e-26 37.5 %
:HMM:PFM   45->347 PF00579 * tRNA-synt_1b 1.3e-81 36.8 285/292  
:HMM:PFM   382->425 PF01479 * S4 2.5e-07 36.4 44/48  
:BLT:SWISS 16->447 SYY_THEFY 0.0 100.0 %
:PROS 55->65|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56076.1 GT:GENE AAZ56076.1 GT:PRODUCT tyrosyl-tRNA synthetase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2392883..2394226) GB:FROM 2392883 GB:TO 2394226 GB:DIRECTION - GB:PRODUCT tyrosyl-tRNA synthetase GB:PROTEIN_ID AAZ56076.1 GB:DB_XREF GI:71916174 InterPro:IPR001412 InterPro:IPR002307 InterPro:IPR002942 LENGTH 447 SQ:AASEQ MARPSKSEEPLRKDPMTDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQRAGHRPIALVGGATGMIGDPKPNAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPKPTDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRLEGAGMSYTEFSYVLLQSYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGTKFGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERPAERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELSGTVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYLVLRRGKRNVGGVILR GT:EXON 1|1-447:0| SW:ID SYY_THEFY SW:DE RecName: Full=Tyrosyl-tRNA synthetase; EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; SW:GN Name=tyrS; OrderedLocusNames=Tfu_2043; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis; RNA-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 16->447|SYY_THEFY|0.0|100.0|432/432| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 55->65|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 242->248|ltttllt| SEG 300->325|eeieeleqktierpaeraaqralaee| BL:PDB:NREP 1 BL:PDB:REP 19->444|2janA|e-106|53.5|415/419| RP:PDB:NREP 2 RP:PDB:REP 7->342|2akeA|2e-51|16.6|314/373| RP:PDB:REP 361->428|3bbnD|2e-04|16.7|66/199| RP:PFM:NREP 1 RP:PFM:REP 46->292|PF00579|1e-26|37.5|224/279|tRNA-synt_1b| HM:PFM:NREP 2 HM:PFM:REP 45->347|PF00579|1.3e-81|36.8|285/292|tRNA-synt_1b| HM:PFM:REP 382->425|PF01479|2.5e-07|36.4|44/48|S4| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00579|IPR002305| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00579|IPR002305| GO:PFM GO:0005524|"GO:ATP binding"|PF00579|IPR002305| GO:PFM GO:0005737|"GO:cytoplasm"|PF00579|IPR002305| GO:PFM GO:0006412|"GO:translation"|PF00579|IPR002305| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00579|IPR002305| RP:SCP:NREP 2 RP:SCP:REP 19->343|1jiiA|e-109|45.4|315/319|c.26.1.1| RP:SCP:REP 345->440|1jh3A|1e-11|37.0|92/99|d.66.1.4| HM:SCP:REP 16->347|1jilA_|6.6e-100|46.3|322/323|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 346->447|1jh3A_|2.1e-18|36.4|99/99|d.66.1.4|1/1|Alpha-L RNA-binding motif| OP:NHOMO 1183 OP:NHOMOORG 1084 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111211111111111111111111111111111111111111111111111111111121112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222122222211221222211121111111111111111111111111111111212111111111111111111111111111111111111111111111111111111111111221111111122222222222211221111211111111122111111111111111111111111111111111111111111111111111-111111111111111111121111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111112111111111111111111111-111111111111111111111111-111-11111111111111111111111222111111111111111111111111111111111111111111111111111111111111111111-11111111111111111222211111111111111111111111111122222221221111111-11111111111111111111111111111111-11111111111111111111111111111111 11--111-1-----111111111111111111111111-21111111111111111111111111111-1111111112111111111-11-11111111111111-121211111-11-11111111-151-11111111111-111--11141111212111111111612221111A11111111211111-1211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 440 STR:RPRED 98.4 SQ:SECSTR ####EEcHHHHHHHHHTccccHHHHTTcEEEEEcHHHHHHHHHTTcEEEEEEEccccccccHHHHHHHHHHHHHHHHHTccEEEEcHHEEEcHHHHHHHHccccHHHHHHHHHHHHHHHHTTTcccccEHHTccTTcEEEEEHHHHHTTccHHHHHHHHHHTccHHHHHHHHcTTcccccTTccHHHHTHHHHHHGGGHHTTccccEEEEEEEGGGHHHHHHHHHHHHHTTccccEEcEEEcccccTTcccccccTTcGGGcccTccccccHHHHHHHcccTTTEcHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHTccHcTHHHHHHHHHHHHHHHHHHHHHHHTcTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHccHHTHHHHHHEEcccTTccccTTEEEETTEEEEEcccccEEEE### DISOP:02AL 1-16, 172-179, 254-256| PSIPRED cccHHHHHHHHccccHHHHHHHHHHccccEEcccHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHcccccccccEEEEEcccccccHHHHHccccccEEcccccccHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccEEEEccccccccHHHHHHHHcccccccHHHHHHHHcccEEEccEEEccccccccHHHHHcccEEEEEEccEEEEEEEEc //