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Thermobifida fusca YX (tfus0)
Gene : AAZ56093.1
DDBJ      :             phenylalanyl-tRNA synthetase beta subunit
Swiss-Prot:SYFB_THEFY   RecName: Full=Phenylalanyl-tRNA synthetase beta chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain;         Short=PheRS;

Homologs  Archaea  3/68 : Bacteria  885/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4d.104.1d.58.13
:831 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->815 2rhsD PDBj 2e-98 34.2 %
:RPS:PDB   1->809 1b70B PDBj e-179 36.9 %
:RPS:SCOP  48->205 1e7zA  b.40.4.4 * 2e-31 16.7 %
:RPS:SCOP  213->395 1b70B6  b.153.1.1 * 4e-41 48.4 %
:RPS:SCOP  409->482 1b70B2  a.6.1.1 * 5e-18 50.0 %
:RPS:SCOP  481->725 1b70B5  d.104.1.1 * 8e-34 25.1 %
:RPS:SCOP  735->809 1b70B4  d.58.13.1 * 3e-25 52.0 %
:HMM:SCOP  37->209 1ntgA_ b.40.4.4 * 7.1e-34 37.9 %
:HMM:SCOP  203->408 1pysB6 b.153.1.1 * 8.5e-70 44.4 %
:HMM:SCOP  409->483 1pysB2 a.6.1.1 * 1.5e-16 37.3 %
:HMM:SCOP  474->727 1pysB5 d.104.1.1 * 1.4e-47 35.0 %
:HMM:SCOP  731->830 1pysB4 d.58.13.1 * 4e-29 47.0 %
:RPS:PFM   48->155 PF01588 * tRNA_bind 3e-16 53.0 %
:RPS:PFM   226->391 PF03483 * B3_4 4e-36 48.8 %
:RPS:PFM   412->478 PF03484 * B5 5e-08 41.8 %
:RPS:PFM   737->830 PF03147 * FDX-ACB 7e-22 48.9 %
:HMM:PFM   222->394 PF03483 * B3_4 1.9e-68 54.9 173/174  
:HMM:PFM   737->830 PF03147 * FDX-ACB 2.2e-28 50.0 94/94  
:HMM:PFM   48->154 PF01588 * tRNA_bind 6.6e-20 38.6 88/95  
:HMM:PFM   412->478 PF03484 * B5 1.9e-14 32.8 67/70  
:BLT:SWISS 1->831 SYFB_THEFY 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56093.1 GT:GENE AAZ56093.1 GT:PRODUCT phenylalanyl-tRNA synthetase beta subunit GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2412153..2414648) GB:FROM 2412153 GB:TO 2414648 GB:DIRECTION - GB:PRODUCT phenylalanyl-tRNA synthetase beta subunit GB:PROTEIN_ID AAZ56093.1 GB:DB_XREF GI:71916191 InterPro:IPR002547 InterPro:IPR004532 LENGTH 831 SQ:AASEQ MRVPVSWLREYVALPAEATARELADKLISLGLEVETVEEVGADISGPIVVGRVLTIEELTGFKKPIRFCTVDVGDANGTGEPQGIICGARNFAEGDLVVVSLPGAVLPGGFAISARKTYGRMSEGMICSASELGLWEDHEGIIVLPEGFAEPGTKADDLLGLRESVLDIAVTPDRGYALSLRGIAREVAAAYGVEFTDPAVRPLPSAAEGGYPASVADPAICSRYVLRGVTGFDPAAPTPLWMRRRLHLCGVRSISLAVDITNYVMLELGQPLHAWDRSTLRGPIEVRLARPGEKLETLDHVVRALDPDDILITDESGPINIAGVMGGLSTEIRETSTDILIEAAHFDAAHIARTSRRHQLSSESSRRFERGVDTDIQLAAATRAVELLAELGGATIEDGITHIDHTVPREPIVVRAGHAGRVAGVDYPVETEIARLRQVGCEVVQEGDTLKVTPPSWRPDLTDPNDLAEEVIRNEGYENIPALLPQAPPGRGLTRGQRLRRAVGRTLADRGFFEVLNYPFVGVRDFDRLRLDEDDARRTAVRLANPLNDDEPLLRTTLLPGLFKALVRNVGRGFTDIALFEMGLVYHPKPDAPAKAPILPVDRAPTAEERATLEAALPEQPRHIGAVLAGQRLRSGWWGGGEPATWADAIHTAKEAASVAGVELIVRAAQYAPWHPGRCAALYVADGDREVLVGHAGELHPRVIKAYGLPSRTSALEIDWDRIEAAAAAATAPQISTYPVATQDVALVVDASVPAAEVEAALREGAGELLESVRLFDVYTGDQVGEGRKSLAYALRLRAHDRTLTVEETNRIKDAAVAAAAERTGAVLRG GT:EXON 1|1-831:0| SW:ID SYFB_THEFY SW:DE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS; SW:GN Name=pheT; OrderedLocusNames=Tfu_2060; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis; RNA-binding; tRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->831|SYFB_THEFY|0.0|100.0|831/831| GO:SWS:NREP 9 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| SEG 33->40|evetveev| SEG 491->502|grgltrgqrlrr| SEG 525->539|rdfdrlrldeddarr| SEG 604->620|raptaeeratleaalpe| SEG 726->733|aaaaaata| SEG 816->822|aavaaaa| BL:PDB:NREP 1 BL:PDB:REP 1->815|2rhsD|2e-98|34.2|765/785| RP:PDB:NREP 1 RP:PDB:REP 1->809|1b70B|e-179|36.9|751/775| RP:PFM:NREP 4 RP:PFM:REP 48->155|PF01588|3e-16|53.0|100/100|tRNA_bind| RP:PFM:REP 226->391|PF03483|4e-36|48.8|162/172|B3_4| RP:PFM:REP 412->478|PF03484|5e-08|41.8|67/70|B5| RP:PFM:REP 737->830|PF03147|7e-22|48.9|94/94|FDX-ACB| HM:PFM:NREP 4 HM:PFM:REP 222->394|PF03483|1.9e-68|54.9|173/174|B3_4| HM:PFM:REP 737->830|PF03147|2.2e-28|50.0|94/94|FDX-ACB| HM:PFM:REP 48->154|PF01588|6.6e-20|38.6|88/95|tRNA_bind| HM:PFM:REP 412->478|PF03484|1.9e-14|32.8|67/70|B5| GO:PFM:NREP 15 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03484|IPR005147| GO:PFM GO:0003723|"GO:RNA binding"|PF03484|IPR005147| GO:PFM GO:0005524|"GO:ATP binding"|PF03484|IPR005147| GO:PFM GO:0006412|"GO:translation"|PF03484|IPR005147| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03484|IPR005147| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 48->205|1e7zA|2e-31|16.7|144/173|b.40.4.4| RP:SCP:REP 213->395|1b70B6|4e-41|48.4|182/209|b.153.1.1| RP:SCP:REP 409->482|1b70B2|5e-18|50.0|74/75|a.6.1.1| RP:SCP:REP 481->725|1b70B5|8e-34|25.1|203/207|d.104.1.1| RP:SCP:REP 735->809|1b70B4|3e-25|52.0|75/94|d.58.13.1| HM:SCP:REP 37->209|1ntgA_|7.1e-34|37.9|161/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 203->408|1pysB6|8.5e-70|44.4|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 409->483|1pysB2|1.5e-16|37.3|75/75|a.6.1.1|1/1|Putative DNA-binding domain| HM:SCP:REP 474->727|1pysB5|1.4e-47|35.0|206/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 731->830|1pysB4|4e-29|47.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 932 OP:NHOMOORG 894 OP:PATTERN --------------------------------------------1----1--1--------------- 1111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222222222222112122212221211221221111111111111111111111121211212221111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------11121-------11-----11--1111111111111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1------1--1---11----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 830 STR:RPRED 99.9 SQ:SECSTR cEEEHHHHHTTccTTTcccHHHHHHHHHHHTccEEEEEEcccccTTcEEEEEEEEEEEETTTTccEEEEEEEccccEEEccEEEEEEccccccTTcEEEEEcTTcccccccccccEEccccEEccEEccHHHHTccccccccccccTTccccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHHTTccccccccccccEEccccccEEEEccTTTccEEEEEEEEcccccccccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEEEEEEccTTcEEEcTTccEEEccTTcEEEEEEETEEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEccccccccEEEcHHHHHHHHTccccHHHHHHHHHHTTcEEEcccccEEEEccTTccccccHHHHHHHHHHHHcGGGccccccccGGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEccTTccTTHHHHTTcccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccTcTTcccccccEEEEHHHHTTTcTTGGGccEEEEEEEEEEcccEEccccEccEEccHHHHHHHHHHHHHHHTcccEEEccccTTccTTcccEEEEcEEETTEEEEEEEEccHHHHHHTTcccccEEEEEEEcccHHHccccccccccccccEEEEEcccEEccccHHHHHHHHHHHccTTEEEEEEEEccccTTccTTEEccEEEEEEccccccccHHHTTcccHHHHHHHHHHcccEEc# DISOP:02AL 831-832| PSIPRED ccccHHHHHHHccccccccHHHHHHHHHHccccccccccccccccccEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEcccccccccEEEEEEEccccccccEEEEEEEcccEEccEEEcHHHcccccccccEEEEcccccccccHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHHcccccccEEcccHHHHHHccccccccccHHHHcccEEEEEEccccEEEEcccEEEEcccccEEEEEccEEEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEEccEEEEccccccccEEEEEHHHHHHHccccccHHHHHHHHHHcccEEEEcccEEEEEccccccccccHHHHHHHHHHHHcHHHcccccccccccccccHHHHHHHHHHHHHHHccccEEEcHHcccHHHHHHHcccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccccccccccccccccHHHHcccccccccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccEEEEEEcccccEEEEEEEEEEcHHHHHHccccccEEEEEEEHHHHHHcccccccccccccccccccEEEEEcccccHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcEEEcc //