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Thermobifida fusca YX (tfus0)
Gene : AAZ56267.1
DDBJ      :             putative spermidine synthase
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  132/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.66.1f.38.1
:528 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   252->515 1uirA PDBj 2e-16 28.7 %
:RPS:PDB   250->464 3c6kD PDBj 4e-27 16.3 %
:RPS:SCOP  242->467 1inlA  c.66.1.17 * 3e-36 20.4 %
:HMM:SCOP  11->205 1pv7A_ f.38.1.2 * 4.9e-06 23.2 %
:HMM:SCOP  228->505 2o07A1 c.66.1.17 * 1.7e-66 33.7 %
:RPS:PFM   252->461 PF01564 * Spermine_synth 4e-25 37.1 %
:HMM:PFM   241->468 PF01564 * Spermine_synth 1.6e-51 32.1 212/246  
:BLT:SWISS 41->528 SPEE1_STRCO 5e-92 45.6 %
:PROS 308->321|PS01330|SPERMIDINE_SYNTHASE_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56267.1 GT:GENE AAZ56267.1 GT:PRODUCT putative spermidine synthase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2630777..2632363) GB:FROM 2630777 GB:TO 2632363 GB:DIRECTION - GB:PRODUCT putative spermidine synthase GB:PROTEIN_ID AAZ56267.1 GB:DB_XREF GI:71916365 InterPro:IPR000051 InterPro:IPR001045 LENGTH 528 SQ:AASEQ MVDTTPAQPAEQKERLPLPPRIARFVVLFAVFVCAACGLVYELALVALGSYLLGDTITQASVVLAVMVFAMGVGSLASKQLTHRPAFWFAVVEGLLSLLGGLSVLILYAAFAWFSLYQPALVSLSFLIGVLIGAEIPLLMTLIQRIRRQEAASAVADLFAADYVGGLIGGLAFPFLLLPVFGLLEGVLLVGILNAVTGIAIVLWLFRHSLTRGGRIGLAAGLALVMAVSGSALALSERFEVDARQALYRDPVVYAERSDYQEIVLTENLARTDLRLFLNGDLQFSSLDEYRYHESLVHPVMNGPRRTVLVLGGGDGLALREILEYADVARVVLVDLDPAVVDLARTHPRITALNRDAFADERVTVVHDDAFTWLRTTTEQFDAIVVDLPDPDDVNTAKLYSVEFYGLVRQAMAEEARVVVQAGSPYFASRAYWSVGQSMEEAGLHTTPYHVDVPSFGDWGFFLAATDRAPALTLPDDLPDTDFLDAAVLHAAQVFPKDRRPGAQGESQPSTLLNPRIIDYHRTAWEGY GT:EXON 1|1-528:0| BL:SWS:NREP 1 BL:SWS:REP 41->528|SPEE1_STRCO|5e-92|45.6|485/531| PROS 308->321|PS01330|SPERMIDINE_SYNTHASE_1|PDOC01033| TM:NTM 7 TM:REGION 24->46| TM:REGION 58->80| TM:REGION 87->109| TM:REGION 121->143| TM:REGION 151->173| TM:REGION 182->204| TM:REGION 213->235| SEG 23->36|arfvvlfavfvcaa| SEG 91->107|vvegllsllgglsvlil| SEG 151->161|aasavadlfaa| SEG 165->193|ggligglafpflllpvfgllegvllvgil| SEG 210->224|ltrggriglaaglal| SEG 308->319|vlvlgggdglal| SEG 326->345|advarvvlvdldpavvdlar| SEG 469->487|apaltlpddlpdtdfldaa| BL:PDB:NREP 1 BL:PDB:REP 252->515|1uirA|2e-16|28.7|258/309| RP:PDB:NREP 1 RP:PDB:REP 250->464|3c6kD|4e-27|16.3|208/348| RP:PFM:NREP 1 RP:PFM:REP 252->461|PF01564|4e-25|37.1|194/226|Spermine_synth| HM:PFM:NREP 1 HM:PFM:REP 241->468|PF01564|1.6e-51|32.1|212/246|Spermine_synth| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF01564|IPR001045| RP:SCP:NREP 1 RP:SCP:REP 242->467|1inlA|3e-36|20.4|211/285|c.66.1.17| HM:SCP:REP 11->205|1pv7A_|4.9e-06|23.2|181/417|f.38.1.2|1/1|MFS general substrate transporter| HM:SCP:REP 228->505|2o07A1|1.7e-66|33.7|273/0|c.66.1.17|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 179 OP:NHOMOORG 169 OP:PATTERN 1111121-111111111211-11--------------1---------------------1--111--- -1-----1111----1111-1---1-111111-1111111---1----------------1-----11211------------1---------------------1----------------------------1---------1-1-1----11------1-1------2---------------1121--1-111111-1-1111111-----11-1---1------------------------------------------------------------------------------------------------------1-1---------1---------------------------1--1---1111----------------1-----------------------------------------------1------1----------------1----------------------------------------111111---------------1---1-1--112-11111---1---1--------------1---1111-------------------------11----------------------------------11--111111111111111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1111------------------------------------------------- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------1----11---3112-12------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 281 STR:RPRED 53.2 SQ:SECSTR ##########################################################################################################################################################################################################################################EEccEEcccccEEEEEEEEEEEEccccEEEEEEEcTTTTEEEEETTEEEEETTcHHHHHHHHTTTTccccTcEEEEEEcTTcHHHHHHHTTcccEEEEEEccHHHHHHHHHHHHHccccGGGccEETTEEEEEccHHHHHHHHTccEEEEEEEcccccccccHHHHHHHHHHHHHHTEEEEEEEEEEEEETTcHcHHHHHHHHHTTcccEEEEEEEEEcGGGccEEEEEEEccTHHHHHHHHTTcccccccHHHHHHTTcccHHHHHHHHHcccccccccc############# DISOP:02AL 1-6, 8-18, 526-528| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEEEccccccEEEEEccEEEcccccccHHHHHcccccccccccEEEEEEccHHHHHHHHHHcccccEEEEEEccHHHHHHHHHccccccccccccccccEEEEEHHHHHHHHcccccccEEEEEccccccccccccccHHHHHHHHHHcccccEEEEEcccHHccHHHHHHHHHHHHHHccEEEEEEEEcccHHHHHHEEEEcccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcHHccccc //