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Thermobifida fusca YX (tfus0)
Gene : AAZ56272.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  307/915 : Eukaryota  176/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:659 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   103->632 1w07B PDBj 8e-68 35.9 %
:RPS:PDB   7->637 2ddhA PDBj 5e-65 30.3 %
:RPS:SCOP  11->253 1siqA2  e.6.1.1 * 9e-30 26.4 %
:RPS:SCOP  279->458 1is2A1  a.29.3.2 * 7e-22 35.6 %
:RPS:SCOP  528->652 1is2A2  a.29.3.2 * 1e-16 27.2 %
:HMM:SCOP  5->258 1w07A3 e.6.1.2 * 7.9e-54 34.5 %
:HMM:SCOP  277->464 1is2A1 a.29.3.2 * 8.1e-50 38.8 %
:HMM:SCOP  491->637 1is2A2 a.29.3.2 * 1.4e-38 35.4 %
:RPS:PFM   186->258 PF00577 * Usher 7e-04 40.3 %
:RPS:PFM   282->440 PF00441 * Acyl-CoA_dh_1 2e-06 34.0 %
:RPS:PFM   528->629 PF01756 * ACOX 1e-17 41.2 %
:HMM:PFM   523->637 PF01756 * ACOX 6.2e-23 31.3 115/186  
:HMM:PFM   280->440 PF00441 * Acyl-CoA_dh_1 1.4e-17 27.3 143/150  
:HMM:PFM   136->193 PF02770 * Acyl-CoA_dh_M 1.7e-14 42.0 50/52  
:HMM:PFM   26->130 PF02771 * Acyl-CoA_dh_N 1.8e-08 29.0 100/113  
:BLT:SWISS 10->648 ACOX2_CUCMA e-110 40.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56272.1 GT:GENE AAZ56272.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2634704..2636683 GB:FROM 2634704 GB:TO 2636683 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56272.1 GB:DB_XREF GI:71916370 InterPro:IPR000971 LENGTH 659 SQ:AASEQ MPQHGDTARVDVEALRDLLDGRWAAVRRRARDILRGPEFTPRYGLSVAEHRARVTEQLHALARTDLARYGFDPRYGGRGEVGASVAAFEMLVCDLSLMVKMGVQWGLFGGAIQALGTEYHHATYLPGVMSLEIPGCFAMTETGHGSDVQRLRTTATFDPNTDEFVVHTPDEAARKDYIGNAARDGRLAVVFAQLITGGQRHGVHALLVPIRDADGTVLPGIRIEDCGPKAGLNGVDNGRIWFTQVRVPRTALLNRYGDVAADGTYSSPIENPNRRFFTMLGTLVRGRISVAGGAGMAAKTALAIAIRYGQVRRQFLRPGSDSEVALLDYLAYQRRLLPALARTYALHFAQEEMVSRLHDGFTDGPLDERAQRELEAHAAGLKAVATWHAVDTIQTCREACGGAGYLAENRLPQLRADTDVFTTFEGDNTVLLQLVGKSLLTNYRQEFGNLDPLGMAKFAAGQFLGTVIERTAARSLLDRLVQAAPGRGDEDDLRNREWQRALLADRENHVLEGLARRLRAAPADADPFDVVNNVQDHVLLAARAHVDRLVFEAFASGVARIEDEGTRAVVERLCDLAALSLVEQERAWFLEHGRLTPARAKAVTATVNALCQELRPHARDLVDAFGLNDEWLAAPIALGAETARQDQQARARVPVGAET GT:EXON 1|1-659:0| BL:SWS:NREP 1 BL:SWS:REP 10->648|ACOX2_CUCMA|e-110|40.1|618/690| SEG 514->527|larrlraapadadp| BL:PDB:NREP 1 BL:PDB:REP 103->632|1w07B|8e-68|35.9|507/658| RP:PDB:NREP 1 RP:PDB:REP 7->637|2ddhA|5e-65|30.3|575/622| RP:PFM:NREP 3 RP:PFM:REP 186->258|PF00577|7e-04|40.3|67/771|Usher| RP:PFM:REP 282->440|PF00441|2e-06|34.0|141/150|Acyl-CoA_dh_1| RP:PFM:REP 528->629|PF01756|1e-17|41.2|102/178|ACOX| HM:PFM:NREP 4 HM:PFM:REP 523->637|PF01756|6.2e-23|31.3|115/186|ACOX| HM:PFM:REP 280->440|PF00441|1.4e-17|27.3|143/150|Acyl-CoA_dh_1| HM:PFM:REP 136->193|PF02770|1.7e-14|42.0|50/52|Acyl-CoA_dh_M| HM:PFM:REP 26->130|PF02771|1.8e-08|29.0|100/113|Acyl-CoA_dh_N| GO:PFM:NREP 9 GO:PFM GO:0005215|"GO:transporter activity"|PF00577|IPR000015| GO:PFM GO:0006810|"GO:transport"|PF00577|IPR000015| GO:PFM GO:0016020|"GO:membrane"|PF00577|IPR000015| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| GO:PFM GO:0003997|"GO:acyl-CoA oxidase activity"|PF01756|IPR002655| GO:PFM GO:0005777|"GO:peroxisome"|PF01756|IPR002655| GO:PFM GO:0006635|"GO:fatty acid beta-oxidation"|PF01756|IPR002655| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01756|IPR002655| RP:SCP:NREP 3 RP:SCP:REP 11->253|1siqA2|9e-30|26.4|220/236|e.6.1.1| RP:SCP:REP 279->458|1is2A1|7e-22|35.6|180/189|a.29.3.2| RP:SCP:REP 528->652|1is2A2|1e-16|27.2|125/181|a.29.3.2| HM:SCP:REP 5->258|1w07A3|7.9e-54|34.5|252/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 277->464|1is2A1|8.1e-50|38.8|188/189|a.29.3.2|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| HM:SCP:REP 491->637|1is2A2|1.4e-38|35.4|147/0|a.29.3.2|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 1581 OP:NHOMOORG 488 OP:PATTERN ------------------------422---12------------------------------------ 2-1363-311-4-15C544-47119544444798A85DDI144721221221454636--33712475683-----------3-----------11---1-21224-221--------------------------35433---4--------------------------------------13211----31222221222222222-222-1222233321-------2--111111-1111111----1------------------------------------------------------------------------1-11111111-11------1----2-2----22---3--2------1-1--4335----------1--212122221222-211------1--121-----1----1---3231211-1--112--------1----2--------------------------------423--13213-----1--111--311111112-33343--2312-143421431--1----12----------211-422-----------111-2-2--22122111---------------------------11--2---2-------------------11---1-1-------------------------------------------------11------------------------------------------111111-----11-----------------66636331111-2123212212224-----------------------11-21--11111111-------1------------------------------------------------------- ----B91-----11522322323413644-222111433323343411--1234--1----1633111121131211111133343---29222213212424979-738J8A35475264554C9495Hm8-8A7454484454353427418345389A85D56BA5828E5E1343A22244735725322EBD93 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 644 STR:RPRED 97.7 SQ:SECSTR ##HHHHHccccHHHHHHHHHTHHHHHHHHHHHHHHTEcGGGcccHHcccGGGccHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHTTcccTTHHHHHTHHHHHHccccHHHHHHHHHHHHTTcccEEEEcccTTccccGGGcccEEEEETTTTEEEEEccccTTcEEccTTTTTTccEEEEEEEEEETTEEEEEEEEEEEcccTTTcccTTEEEEEcccccccTTcccEEEEEccEEEEGGGccccccEEcTTccEEEEccTTTcHHHHEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccTTcccccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHTHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHcGGGcHHHHHHHHGGGGTccccHHHHHHHHHHHHHHHHHHHHHTccccGGGGGGGGcccccGGGGcccTTcHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTcccHHHHHHHHHHHHHHHHHHGGGHHHHHHTTcccHHHHTccTTHTccTTcTT############# DISOP:02AL 1-3, 517-528, 657-659| PSIPRED cccccccccccHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHcccccccccHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHccHHHHHHHcccccccccHHHcEEEEEEcccccEEEEEcccccEEEEEcccccccccEEEEEEEccccccccccEEEEEEcccccccccccEEEccccccccccccccEEEEEccEEccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHcc //