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Thermobifida fusca YX (tfus0)
Gene : AAZ56286.1
DDBJ      :             aminotransferase
Swiss-Prot:             

Homologs  Archaea  62/68 : Bacteria  833/915 : Eukaryota  170/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:430 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->377 1bkgA PDBj 5e-36 36.6 %
:RPS:PDB   3->377 3ei6A PDBj 4e-29 19.9 %
:RPS:SCOP  25->417 1d2fA  c.67.1.3 * 9e-27 14.6 %
:HMM:SCOP  1->376 1iayA_ c.67.1.4 * 3.9e-73 30.5 %
:RPS:PFM   46->280 PF00155 * Aminotran_1_2 2e-19 38.1 %
:HMM:PFM   43->375 PF00155 * Aminotran_1_2 9.6e-49 28.0 314/363  
:BLT:SWISS 2->376 AAT_THEAQ 2e-39 34.4 %
:PROS 225->238|PS00105|AA_TRANSFER_CLASS_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56286.1 GT:GENE AAZ56286.1 GT:PRODUCT aminotransferase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2653392..2654684) GB:FROM 2653392 GB:TO 2654684 GB:DIRECTION - GB:PRODUCT aminotransferase GB:PROTEIN_ID AAZ56286.1 GB:DB_XREF GI:71916384 InterPro:IPR001176 InterPro:IPR004838 LENGTH 430 SQ:AASEQ MSVAVSATLAVNEALARRRSQGLPVLPLGFGEAGLPVHPVMRDALSTGGDQNGYGPVAGIRELREAAAGYWERRGLPTDPDLVVAGPGSKPLLYALLLAIGGDVAIAAPSWVSYAAQSHLSGGQPLFVPTAPAQGGVPEPDALAQAVTEARAAGRDIRAVITTCPDNPTGTVASRGTVRRLTEVAQELDLVIISDEIYRDLVHDPTTVVHSPAEFAPERTVITTGLSKNLALGGWRIGVARLPDSDTGRHIHAALLGIASEIWSSPSGPVQRAAAYAFQEPAEIVDLVARSRRLHGLVARAVAERFRAAGVPVIAPQAAFYLYPDFGVWREWLGEAHGVTTGPELTRMLLDRYGMGVLPAVEFGESTHALRVRVATSLLYGESEAQRYSALAAEDPTALPWIRAHLDRISEVLDEVRQEQPAVAVPAMAS GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 2->376|AAT_THEAQ|2e-39|34.4|349/383| PROS 225->238|PS00105|AA_TRANSFER_CLASS_1|PDOC00098| TM:NTM 1 TM:REGION 90->112| SEG 298->311|varavaerfraagv| BL:PDB:NREP 1 BL:PDB:REP 6->377|1bkgA|5e-36|36.6|344/382| RP:PDB:NREP 1 RP:PDB:REP 3->377|3ei6A|4e-29|19.9|361/410| RP:PFM:NREP 1 RP:PFM:REP 46->280|PF00155|2e-19|38.1|223/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 43->375|PF00155|9.6e-49|28.0|314/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 25->417|1d2fA|9e-27|14.6|355/361|c.67.1.3| HM:SCP:REP 1->376|1iayA_|3.9e-73|30.5|364/428|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 3201 OP:NHOMOORG 1065 OP:PATTERN 33--22122222222154132224533433541-133-111116544544655-33344441221-23 4452223334423234333-3311543233353555475434444244133178633411342-545566336666552123242433345322--1--42434342333---------------22244312124333222223332354433333121222243455641221---3112-1221211154433333334433333312333433346533333333333511111111111111-1111142123327131554433-324743333332122333333333333332222222222222332333333324263333333333222222222323-21422222245212343342112332444411111318565534444433333333335-557557565B216445659766566623235434325485555555554445546111111111111111111111111111112145233A7456445475455555555455554565557-243955655454354333332214222222222434316541447155556-121232343443524371211222222111111111112122221112522121-1211111111111111112---3542------34441433333333333-3343333333323333333564321113333233333333333322233331-333343344444--1111111333346362111112-1111111144444341115155657979576664665422223222211111111111111223232222312222242111111------------------------------------3222223222352 ----1-4-32--2232322353332353323223212333222323124533431231311111121--1-141211-11-11-21-1-253321233233-2444-2314343433-3212227217-392-311112-3--73111-14-13153221-2-313-433144242123R554239ACL2F35387993 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 429 STR:RPRED 99.8 SQ:SECSTR ccccHHHHHHHHHHHHHHHcTTcccEEcccccccccccHHHHHHHHHHHHHcccccTTccHHHHHHHHHHHHHTTTTccGGGEEEEccHHHHHHHHHHHHcTTccEEEcccTHHHHHHHHHTccccEETTTTEETTcEEEccGGGTTcccGGGcccccEEEEEcccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTGGGccccccccGGGcTTGGGTEEEEEEcHHHHcTTTTccEEEEccTTcTcccHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEcccccEEEEEcTTccHccccGGGTcccHHHHHHHHHHHcEEcEEGGGGcGGGTTEEEEccccEEccccHHHcTTcccHHHEcccccHHHHHHHHGGGGGGHcccccEEEEEccc# DISOP:02AL 429-430| PSIPRED cccccHHHHHHHHHHHHHHHccccEEEcccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccEEEEccHHHHHHHHHHccccEEEEEccccccHHHHHHHHccEEEEEEccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEcccHHHHccccccccHHHHcccccEEEEEEcHHHccccccEEEEEEEccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccEEEEEEccHHHHHcccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHcc //