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Thermobifida fusca YX (tfus0)
Gene : AAZ56308.1
DDBJ      :             putative integral membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  138/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   136->249 3c1qB PDBj 2e-13 18.7 %
:RPS:PFM   144->248 PF00482 * GSPII_F 4e-05 34.0 %
:HMM:PFM   143->262 PF00482 * GSPII_F 1.4e-19 31.3 115/124  
:HMM:PFM   58->140 PF00487 * FA_desaturase 6.9e-05 19.2 78/257  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56308.1 GT:GENE AAZ56308.1 GT:PRODUCT putative integral membrane protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2679934..2680866 GB:FROM 2679934 GB:TO 2680866 GB:DIRECTION + GB:PRODUCT putative integral membrane protein GB:PROTEIN_ID AAZ56308.1 GB:DB_XREF GI:71916406 LENGTH 310 SQ:AASEQ MNHYPLLILLITIITLVIAVWGVVVFLDGVAQRRMLAARSVLAEVERRANSPMARLDVRLRRTELGRQIRTRLDRAGVQMKVSSFALLVAACAVAAIVIVWHVLAPLLGLCAAALVGYLFLAYLNRQEEKRREAFTAQLPELARVLSNATQAGLALPTAIDMAADELADPAGAELRHVAESIKVGQPFEEALNDLRKRMPSREIGVLISTLLVSARSGGALVTALRNISETLENRKETRREVRTILSETTSTAWTLLLMGVGSLFLLNALMPGTVARMTESFAGLVVLGAALTLFTIGFVVIRRMSRIDF GT:EXON 1|1-310:0| TM:NTM 4 TM:REGION 11->32| TM:REGION 93->115| TM:REGION 252->274| TM:REGION 281->302| SEG 6->18|llillitiitlvi| SEG 86->115|allvaacavaaivivwhvlapllglcaaal| SEG 256->267|lllmgvgslfll| SEG 282->296|faglvvlgaaltlft| RP:PDB:NREP 1 RP:PDB:REP 136->249|3c1qB|2e-13|18.7|107/112| RP:PFM:NREP 1 RP:PFM:REP 144->248|PF00482|4e-05|34.0|100/124|GSPII_F| HM:PFM:NREP 2 HM:PFM:REP 143->262|PF00482|1.4e-19|31.3|115/124|GSPII_F| HM:PFM:REP 58->140|PF00487|6.9e-05|19.2|78/257|FA_desaturase| OP:NHOMO 164 OP:NHOMOORG 139 OP:PATTERN -------------------------------------------------------------------- 1-3--------------------------------------------------22-------1----1111---------1--------------------------------------------11----121--11132---11-------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------1-------1---------------21111-------11111111111----------1-111112112311111121211211--1211--1111-11-------------1--------------------------------1212------111111-------221111-12111121--111----1--111------1------------11------11-1-1-111-2------111-1-1-11--------------------------------------1-----------1----11-----------------------------------------------------11----------------------------------------------------------1---------------------------------------------------------1------2111------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 114 STR:RPRED 36.8 SQ:SECSTR #################################################################################################################################ccccccHHHHHHHHHHHHHHHHTT#cHHHHHHHHHHTcccHHHHHHHHHHHHHHTTccHHHHHTTcTTTccH#####HHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH############################################################# DISOP:02AL 32-64, 236-248| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcc //