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Thermobifida fusca YX (tfus0)
Gene : AAZ56330.1
DDBJ      :             regulatory protein, MarR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:160 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->120 2nyxA PDBj 1e-04 29.1 %
:RPS:PDB   11->149 2eb7A PDBj 5e-08 18.1 %
:RPS:SCOP  41->149 2ethA1  a.4.5.28 * 2e-12 22.0 %
:HMM:SCOP  10->152 1jgsA_ a.4.5.28 * 1.2e-23 39.1 %
:HMM:PFM   40->97 PF01047 * MarR 4.3e-14 39.7 58/59  
:BLT:SWISS 40->147 YFIV_BACSU 3e-08 25.0 %
:PROS 72->106|PS01117|HTH_MARR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56330.1 GT:GENE AAZ56330.1 GT:PRODUCT regulatory protein, MarR GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2705162..2705644 GB:FROM 2705162 GB:TO 2705644 GB:DIRECTION + GB:PRODUCT regulatory protein, MarR GB:PROTEIN_ID AAZ56330.1 GB:DB_XREF GI:71916428 InterPro:IPR000835 LENGTH 160 SQ:AASEQ MDSGASDTKRELIDRLRDLEIRQLKLFLRDRSLPLLSTTLTIQQLKVLVALAIDGNTPTHELAERVGVSVATLTGIVDRLAARSLVFRREDPADRRVRRVDLTEEGRALVNDMWGASHKRMSEALQTLDVETLRSLVRGAEALYAALLRSSPSTSAGWER GT:EXON 1|1-160:0| BL:SWS:NREP 1 BL:SWS:REP 40->147|YFIV_BACSU|3e-08|25.0|108/160| PROS 72->106|PS01117|HTH_MARR_1|PDOC00861| SEG 88->101|rredpadrrvrrvd| BL:PDB:NREP 1 BL:PDB:REP 8->120|2nyxA|1e-04|29.1|110/144| RP:PDB:NREP 1 RP:PDB:REP 11->149|2eb7A|5e-08|18.1|138/141| HM:PFM:NREP 1 HM:PFM:REP 40->97|PF01047|4.3e-14|39.7|58/59|MarR| RP:SCP:NREP 1 RP:SCP:REP 41->149|2ethA1|2e-12|22.0|109/140|a.4.5.28| HM:SCP:REP 10->152|1jgsA_|1.2e-23|39.1|133/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------1----------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 92.5 SQ:SECSTR #cccTcccHccHHHHHHHHHHHHHHHHHHHHHHHHGGGTccHHHHHHHHHHTTccccHHHHHHHHTTccHHHHHHHHHHHHHTTcEEEEEccccTTcEEEEEcHHHHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHH########### DISOP:02AL 1-5, 148-160| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccc //