[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ56335.1
DDBJ      :             putative cation transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  353/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:469 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   177->445 PF02386 * TrkH 3e-28 38.8 %
:HMM:PFM   41->117 PF02386 * TrkH 3.1e-06 25.0 76/339  
:HMM:PFM   153->451 PF02386 * TrkH 6.4e-65 32.8 299/339  
:BLT:SWISS 36->469 KTRB_BACSU 6e-52 31.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56335.1 GT:GENE AAZ56335.1 GT:PRODUCT putative cation transporter GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2709505..2710914 GB:FROM 2709505 GB:TO 2710914 GB:DIRECTION + GB:PRODUCT putative cation transporter GB:PROTEIN_ID AAZ56335.1 GB:DB_XREF GI:71916433 LENGTH 469 SQ:AASEQ MGERLRGLRSKAVRLSHRLPFGVLFPRASRILWGKPARILASLFGAVILLGTGLLLLPVAQQTQVSPVEALFTATSALCVAGLSITDPAHDWSFFGQLVILGLIQVGGIGIMTLASLLGMVVIRRFGLRMQLSVQSEQRTLNVGGTREVVWRIAATSVICEAVLALLLIPRMWLGHGLPLPEAVYSGVFHSVSAFNNAGLSLYPDSLTRFAGDPLVLVPIMAATVLGGLGFPVLLELRKHLRTPRRWSLHTKMTVWTSLLLFVGGMVVVTALEWGNPATLGPLPWPHKLLDGAFHGVMPRSGGFNVVPVDAMESHTLLVTIMLMFVGGGSAGTAGGIKVSTFAVIWLVVWAEIRGHPQVHAFGRRLSAGAIRQALSLTFLSMTVIALATVYLTAVSPFSSQEVLFDVVSAFGVVGLSTGVAAGLPQHGQVLLVILMFAGRLGPITFASALALRERTRRYDLPEGRPVIG GT:EXON 1|1-469:0| BL:SWS:NREP 1 BL:SWS:REP 36->469|KTRB_BACSU|6e-52|31.5|425/445| TM:NTM 11 TM:REGION 38->60| TM:REGION 66->88| TM:REGION 102->123| TM:REGION 151->173| TM:REGION 214->236| TM:REGION 253->275| TM:REGION 305->327| TM:REGION 335->356| TM:REGION 374->396| TM:REGION 403->425| TM:REGION 430->452| SEG 49->57|llgtgllll| SEG 96->111|gqlvilgliqvggigi| SEG 327->336|gggsagtagg| RP:PFM:NREP 1 RP:PFM:REP 177->445|PF02386|3e-28|38.8|263/327|TrkH| HM:PFM:NREP 2 HM:PFM:REP 41->117|PF02386|3.1e-06|25.0|76/339|TrkH| HM:PFM:REP 153->451|PF02386|6.4e-65|32.8|299/339|TrkH| GO:PFM:NREP 3 GO:PFM GO:0006812|"GO:cation transport"|PF02386|IPR003445| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF02386|IPR003445| GO:PFM GO:0055085|"GO:transmembrane transport"|PF02386|IPR003445| OP:NHOMO 439 OP:NHOMOORG 356 OP:PATTERN -------------------------------------------------------------------- -----11----111----------------------1-------111-1111122221--11---11---11111-11----11----1111-1--1---1--1----1-------------------------1111111----2111211111111111111111111111111-111111212--11--2133333333333333312331243311122221111112321111111111111122222211----1---1111---1-11----11111111--1111111111111111111111111111111111-22--111111121211111111211111111111111-2111111-111------------------------------------------1---------------------1--1-------------------------------------------------------1------------------------------------------------1---11-----------------21--11-1121111111--------1------11-1--1-111111-1--------1-----11-----1----1111---1111-2--1----------------------------------------------------------------------------------------------------------------1-11------------11-1111111111----------1----1-------------1111-----12111----------------112222221--11111111----1-1111-1-11111-11----------------2 -------------------------------------------------------1-------1----------------------------------------1---------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 133-148, 354-369, 452-460| PSIPRED ccccccccccHHHHHHHHccccEEccHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc //