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Thermobifida fusca YX (tfus0)
Gene : AAZ56343.1
DDBJ      :             putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  109/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:377 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->361 2jifB PDBj 8e-12 21.4 %
:RPS:PDB   6->374 2ebaA PDBj 1e-22 16.5 %
:RPS:SCOP  7->143 1rx0A2  e.6.1.1 * 2e-14 18.6 %
:RPS:SCOP  244->374 1siqA1  a.29.3.1 * 7e-15 18.5 %
:HMM:SCOP  6->220 2c12A2 e.6.1.1 * 9.4e-25 34.4 %
:HMM:SCOP  223->371 1r2jA1 a.29.3.1 * 1.2e-36 39.6 %
:RPS:PFM   49->89 PF02771 * Acyl-CoA_dh_N 7e-06 61.0 %
:RPS:PFM   244->368 PF00441 * Acyl-CoA_dh_1 2e-11 34.7 %
:HMM:PFM   232->369 PF00441 * Acyl-CoA_dh_1 3.5e-32 35.0 137/150  
:HMM:PFM   12->126 PF02771 * Acyl-CoA_dh_N 5.6e-20 43.5 108/113  
:HMM:PFM   118->138 PF12372 * DUF3652 0.00052 47.4 19/43  
:BLT:SWISS 12->359 ACDP_MYCLE 7e-13 35.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56343.1 GT:GENE AAZ56343.1 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2717502..2718635 GB:FROM 2717502 GB:TO 2718635 GB:DIRECTION + GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID AAZ56343.1 GB:DB_XREF GI:71916441 LENGTH 377 SQ:AASEQ MSESELNLLYSEIEQELRASVRELLAHRCPWQSVLDRVSHHAPAEVTDRALWQELAELDVLGLFVPETLGGAGATAREASSVAEELGRAVAPVPFLGSAVLATGALVALGTAEEQVRALLTDLAAGQRCATLVVPLPTAPGSGFPSQVRADGSQLTGTVPGVVDALSADVLVVPALGAEGPGLYLLPADQATLSPVVSLDQTRPLAEVTLTGAEATRVAVGQQAVDAVEAALLTGAVLLAAEQLGTAEWAFDTTVAYLKERVQFARPIGSFQALKHRVADLWVLLAQARAVVRHAASALAADSEDLPLAAALAQAFVSEVAVKVTEEAVQLHGGIGFTWEHPVHLYLKRAKSASLSLGTADRHRARIADLVGLPPAP GT:EXON 1|1-377:0| BL:SWS:NREP 1 BL:SWS:REP 12->359|ACDP_MYCLE|7e-13|35.8|330/389| SEG 99->112|avlatgalvalgta| SEG 162->176|vvdalsadvlvvpal| SEG 227->242|aveaalltgavllaae| SEG 284->313|llaqaravvrhaasalaadsedlplaaala| BL:PDB:NREP 1 BL:PDB:REP 10->361|2jifB|8e-12|21.4|345/377| RP:PDB:NREP 1 RP:PDB:REP 6->374|2ebaA|1e-22|16.5|363/380| RP:PFM:NREP 2 RP:PFM:REP 49->89|PF02771|7e-06|61.0|41/113|Acyl-CoA_dh_N| RP:PFM:REP 244->368|PF00441|2e-11|34.7|124/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 232->369|PF00441|3.5e-32|35.0|137/150|Acyl-CoA_dh_1| HM:PFM:REP 12->126|PF02771|5.6e-20|43.5|108/113|Acyl-CoA_dh_N| HM:PFM:REP 118->138|PF12372|0.00052|47.4|19/43|DUF3652| GO:PFM:NREP 4 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 7->143|1rx0A2|2e-14|18.6|129/231|e.6.1.1| RP:SCP:REP 244->374|1siqA1|7e-15|18.5|130/154|a.29.3.1| HM:SCP:REP 6->220|2c12A2|9.4e-25|34.4|212/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 223->371|1r2jA1|1.2e-36|39.6|149/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 291 OP:NHOMOORG 112 OP:PATTERN -------------------------11----------------------------------------- ---13---------28633-3A--67333334A79739AC-81B----------------223-1221112------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------1--1-------1----1-2444-------211---11221----------------------3----------------41---------1----------------------------------------------2351------11112111111112-1111112123252--------1------2-------1---------------2-----------------------------1---------------------------------1--4--------1----1-1--11---------------------------------------------------------------------------------------------------------------1-------------------------------1--1-----------------------------------------------------1111--------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 376 STR:RPRED 99.7 SQ:SECSTR #TTHcGGGGccHHHHHHHHHHHHHHHHHTHHTccHTHHHHHHHTTcccGGGHHHHHHHTcccTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHTTHHHHHHHccHHHHHHHHHHHHTTcccEEEEcccTTcTTcTTTTcccEEccEEEEEEEEEEEETTTTccEEEEEEEccEEEEEEETTcTEEEEcccccccccEEEEEEEEEEEEGGGcccccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGcTTccHHHHHHHHHHHTTccccHHHHHHHHHHHHcccTHH DISOP:02AL 375-377| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEccccccccHHEEEEEEccEEEEEEEEEEcccccccEEEEEEEcccccEEEEEEcccccEEEEccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccc //