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Thermobifida fusca YX (tfus0)
Gene : AAZ56365.1
DDBJ      :             putative cholesterol oxidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  82/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:622 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   215->330,496->546 3coxA PDBj 1e-08 51.0 %
:RPS:PDB   7->545 1cf3A PDBj 5e-16 11.9 %
:RPS:SCOP  7->302 1cf3A1  c.3.1.2 * 2e-12 10.9 %
:RPS:SCOP  486->558 1tzlA1  c.3.1.2 * 7e-10 20.5 %
:HMM:SCOP  16->560 1cf3A1 c.3.1.2 * 2.8e-44 29.7 %
:RPS:PFM   485->544 PF05199 * GMC_oxred_C 3e-10 48.3 %
:HMM:PFM   488->545 PF05199 * GMC_oxred_C 3.3e-17 43.1 58/145  
:HMM:PFM   228->330 PF01266 * DAO 3e-05 23.8 84/358  
:HMM:PFM   20->52 PF00890 * FAD_binding_2 1.8e-07 42.4 33/421  
:HMM:PFM   116->140 PF10128 * OpcA_G6PD_assem 0.00093 44.0 25/270  
:BLT:SWISS 216->318,490->544 CHOD_STRS0 5e-08 50.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56365.1 GT:GENE AAZ56365.1 GT:PRODUCT putative cholesterol oxidase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2745520..2747388 GB:FROM 2745520 GB:TO 2747388 GB:DIRECTION + GB:PRODUCT putative cholesterol oxidase GB:PROTEIN_ID AAZ56365.1 GB:DB_XREF GI:71916463 LENGTH 622 SQ:AASEQ MTHEQHSTLPTGDDDRFDYDVIVVGSGFGGSVSALRLTEKGYRVGVLEAGRRFTPETLPKNSWDLRNFLWAPRLGFFGIQRIHLLRDVMILAGAGVGGGSLNYANTLYEPLDDFYNDPQWRDITDWREELAPFYDQAKRMLGVRTNPTVTPADVHLRHAAEAMGVGSTFHLAPVGVFFGDGKDGAATQPVSPGEACRDPYFGGAGPTRRACLECGECMTGCRHGAKNMLTENYLYFAERHGAVIHPMTTVVAIRERPASLGGGYAVDTVATGAFRTRRATRTFTARYIVLAAGTYGTQRLLHAMRDSGLLPRISPKLGTLTRTNSEALVGAMTKAIRPPQDFTQGVAITSSMHPDAHTHIEPVRYGKGSNAMGLLTTMQVPGGGRIPRWLRFLGVIAAHPYLFMRSLSVRRWSQRTIIGLVMQSLDNSLTTYTRRGLFGRRVLTSRQGHGAPNPTWIPVAQQFAAQIAKQIDGYPGSCVSEIFDIPLTAHFLGGCPIGASPEEGVIDPYHRLYGHPGIHVVDGSAVTANLGVNPSLTITAQAERAMAMWPNKGEPDPRPAPGSPYQRVEPVYPVRPAVPAGAYAELRFTRRIALPLDVSRPQRTPGGTGTDTVRRTDAPPAP GT:EXON 1|1-622:0| BL:SWS:NREP 1 BL:SWS:REP 216->318,490->544|CHOD_STRS0|5e-08|50.0|149/546| SEG 21->33|vivvgsgfggsvs| SEG 270->286|atgafrtrratrtftar| SEG 460->471|aqqfaaqiakqi| SEG 603->616|rtpggtgtdtvrrt| BL:PDB:NREP 1 BL:PDB:REP 215->330,496->546|3coxA|1e-08|51.0|164/500| RP:PDB:NREP 1 RP:PDB:REP 7->545|1cf3A|5e-16|11.9|523/581| RP:PFM:NREP 1 RP:PFM:REP 485->544|PF05199|3e-10|48.3|60/140|GMC_oxred_C| HM:PFM:NREP 4 HM:PFM:REP 488->545|PF05199|3.3e-17|43.1|58/145|GMC_oxred_C| HM:PFM:REP 228->330|PF01266|3e-05|23.8|84/358|DAO| HM:PFM:REP 20->52|PF00890|1.8e-07|42.4|33/421|FAD_binding_2| HM:PFM:REP 116->140|PF10128|0.00093|44.0|25/270|OpcA_G6PD_assem| GO:PFM:NREP 1 GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF05199|IPR007867| RP:SCP:NREP 2 RP:SCP:REP 7->302|1cf3A1|2e-12|10.9|284/385|c.3.1.2| RP:SCP:REP 486->558|1tzlA1|7e-10|20.5|73/379|c.3.1.2| HM:SCP:REP 16->560|1cf3A1|2.8e-44|29.7|323/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 109 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- -12-2------1-121111-12111111111111114222-111----------1-----221-3211121--------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111--1-1111-1--1--1-----11-------1---------1--------------21----------------------111151-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------11-11------1------1----------------------------------------------------111233------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 576 STR:RPRED 92.6 SQ:SECSTR ######ccccGGGTTTcEEEEEEEcccHHHHHHHHHHTTcTccEEEEEcccccTTccHHHHcGGGTTTTTTcTTcccEEcTTTccccEEcccccTTGGGGTcccccccccHHHHHHHHHTTccTTccHHHHHHHHHHEEEccccHHHHHHTccccGGGccccccEEEccccccccccTHHHHHHHHHHTEcTTccccccTTccHTTcccccEEEcccccccTTcccccHHHHHTGGGTcTTEEEEEccEEEEEEEEcTcccccccEEEEEEEEEETTEEEEEEEEEEEEEcccTTTHHHHHHHHGGGTccccccccTTccccccEEEEEEEEEcHHHGGGHHHHHHHHHHcHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHTTccEEEEEEEEcTTEEEEEEEEcccccccEEEEEEccTTccHHHHHHHHHHHHHHHHHHTcGGGGGTEEEEEEcGGGccTTccHHHHHHHGGGcccEEcccEEccccccTTccccGGGTccccTTcccTTcccEEEccTTccccccccccHHHHHHHHHHHHHHEEEEEEEEEEccEEEEEEEEEccccHHHHHHHHH######################################## DISOP:02AL 1-6, 8-11, 554-567, 616-622| PSIPRED ccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHcccccccccccccccccccEEEcccEEcccHHHHcEEEccccHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccEEEccccccHHHccHHHHHHHHHHHcccEEEEccEEEEEEEcccccEEEEEEEEEEcccEEcccEEEEEEccEEEEEEcccHHHHHHHHHHHccccccccccccccccccccHHEEEEEccccccccccccccEEEEEccccccccccccccccccHHHcccHHcccccccHHHHHHHHHHHHcccHHHHHHHccccccccEEEEEEEcccccccccccccccccccEEEHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEccccEEccccccccEEccccEEEccccEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEcccEEccccccccccccccccEEccccccc //