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Thermobifida fusca YX (tfus0)
Gene : AAZ56369.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  66/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.146.1
:448 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->149 1yzyA PDBj 1e-04 24.1 %
:RPS:PDB   1->279 3dqqA PDBj 1e-19 18.9 %
:RPS:SCOP  6->384 1yzyA1  c.146.1.1 * 5e-41 22.1 %
:HMM:SCOP  4->424 1yzyA1 c.146.1.1 * 2e-67 34.5 %
:HMM:PFM   162->382 PF07005 * DUF1537 5.1e-30 32.2 202/223  
:BLT:SWISS 6->149 Y1011_HAEIN 4e-04 24.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56369.1 GT:GENE AAZ56369.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2749800..2751146) GB:FROM 2749800 GB:TO 2751146 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56369.1 GB:DB_XREF GI:71916467 LENGTH 448 SQ:AASEQ MAQVLVIADDLIGAAATAARFARAGQRVTMVAPEQVARVAEDHDVIVANLDSRHMPPHQATDLVADVVEAVWPVGLVIKRIDTTLRGNLGAEVEAAWTEVRERCPPQTRLRVIVVPAFPAAGRTTVDGVQLLDGTPVDRTEAALDPLSPTAAADVAEVVAQQSSLRVRRIPVRQVTPELLTAELAAGDEPVVLCDADTTTYLAELAEAAARAHREHGIVWLAADPGPFGVLLAEALHLHGEGITAGPLLAAVGSVTELTARQLDAVVRSGPVRWVDAAPEDVEREDSREKLAHTLADALASHAFPDVVVFRLRATAAEIAALPLPQRRLIPERLAEVIATAVTDAHEQDGALGRPSGMLIAGGDLTSAVLDVLGVQTFDIGGEMLPLTVHGVLGGGVLDGVPLIAKSGLVGDSSAIADCLGRLRRAVQTRLRTVRAEVVEHFPFTAGA GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 6->149|Y1011_HAEIN|4e-04|24.1|137/100| SEG 14->24|aaataarfara| SEG 151->160|aaadvaevva| SEG 202->216|laelaeaaarahreh| SEG 385->403|lpltvhgvlgggvldgvpl| BL:PDB:NREP 1 BL:PDB:REP 6->149|1yzyA|1e-04|24.1|137/412| RP:PDB:NREP 1 RP:PDB:REP 1->279|3dqqA|1e-19|18.9|270/419| HM:PFM:NREP 1 HM:PFM:REP 162->382|PF07005|5.1e-30|32.2|202/223|DUF1537| RP:SCP:NREP 1 RP:SCP:REP 6->384|1yzyA1|5e-41|22.1|353/412|c.146.1.1| HM:SCP:REP 4->424|1yzyA1|2e-67|34.5|397/0|c.146.1.1|1/1|YgbK-like| OP:NHOMO 70 OP:NHOMOORG 66 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------1--1---1-----------1------------------------------------------------------------------------------------------------------------------------------21111------1-1---------1--------------------------------------------------------------------------------------------1--11-1111-1-----1--------1-11---------11-1--11--------------------------------------------------------1-----------------------------------------------------------------------1---1111-1------------------------------------1-------------------------------1-----------------------------------------------------1------------------------------------------1-------1-111--------1-----1-------122-1---1-111111-1111111-------------------------------------------1-2--------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 405 STR:RPRED 90.4 SQ:SECSTR cccEEEEEccHHHHHHHHHHHHHTTccEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHTTcccTTccccTTccHHHHHHHHHHHTTccc######cEEEEcccGGGTEEEETTEEEETTEEGGGcGGGGccccccccccHHHHHHTTccccEEEEcHHHHHHcHHHHHHHHTTccEEEEccccHHHHHHHHHHHTTccEEEEcHHHHHHHHHHHHTTccccGGGcc##ccccEEEEEccccHHHHHHHHHHTTTccEEEccGGGGccHHHHHHHHHHHHHHHHTcccccccEEEccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHT########TccEEEEEcHHHHHHHHHHHTccEEEEEEEE###ETTEEEEEEcccccEEEEEcTTcccTTHHHHHHHTTc######################## DISOP:02AL 232-247| PSIPRED ccEEEEEEcccccHHHHHHHHHHccccEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHcccccccccccEEEEEcccccccEEEEcEEEEccEEcccccHHccccccccccHHHHHHHHHccccEEEccHHHHcHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHccccccccccccEEEEEEccHHHHHHHHHHHHHHcccEEEEccHHHHccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccHHHHHHHHccccEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //