[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ56384.1
DDBJ      :             aminomethyltransferase
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  634/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
b.44.2d.250.1
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->370 1yx2B PDBj 6e-65 39.9 %
:RPS:SCOP  8->276 1pj5A4  d.250.1.1 * 2e-67 29.7 %
:RPS:SCOP  308->371 1v5vA1  b.44.2.1 * 4e-15 35.9 %
:HMM:SCOP  7->290 1v5vA2 d.250.1.1 * 4.6e-99 53.2 %
:HMM:SCOP  280->374 1vloA1 b.44.2.1 * 1.4e-23 43.5 %
:RPS:PFM   53->264 PF01571 * GCV_T 4e-52 52.2 %
:RPS:PFM   313->356 PF08669 * GCV_T_C 8e-04 66.7 %
:HMM:PFM   53->265 PF01571 * GCV_T 2e-77 52.4 210/211  
:HMM:PFM   273->364 PF08669 * GCV_T_C 1e-23 41.3 92/95  
:BLT:SWISS 7->372 GCST_SACEN e-104 58.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56384.1 GT:GENE AAZ56384.1 GT:PRODUCT aminomethyltransferase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2767523..2768641 GB:FROM 2767523 GB:TO 2768641 GB:DIRECTION + GB:PRODUCT aminomethyltransferase GB:PROTEIN_ID AAZ56384.1 GB:DB_XREF GI:71916482 InterPro:IPR006223 LENGTH 372 SQ:AASEQ MTQPPTSDARTTPLYDTHVASGATMVEFAGWLMPLRYRSESAEHRAVRDAAGLFDLSHMGEIRVHGPQAADCLDYALVGQLSTLAVGRARYTMIVTEQGGVLDDLIVYRLADDDYLVVANAANTGTVAAALTERAAGFTATITDETADYALLALQGPQSAAILGPLTDVDLSALRPYAAQHGTVAGTAVLLSRTGYTGEDGFEIYLRPGTAAPALWDTLVEAGQPHGLLPAGLAARDTLRLEAGMPLYGNELTAELTPYDAGLGRVVKLDKPGDFVGRAALAARASSGPTQVLVGLVGRGRRVPRKGYPVLRDGVPVGTVTSGAPSPTLGKPIAIAAVKAGTDLSSGAFAVDVRGRAEAVDVVDLPFYRRTS GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 7->372|GCST_SACEN|e-104|58.9|365/367| SEG 116->132|lvvanaantgtvaaalt| SEG 277->288|graalaarassg| SEG 292->307|vlvglvgrgrrvprkg| BL:PDB:NREP 1 BL:PDB:REP 10->370|1yx2B|6e-65|39.9|353/355| RP:PFM:NREP 2 RP:PFM:REP 53->264|PF01571|4e-52|52.2|209/211|GCV_T| RP:PFM:REP 313->356|PF08669|8e-04|66.7|39/94|GCV_T_C| HM:PFM:NREP 2 HM:PFM:REP 53->265|PF01571|2e-77|52.4|210/211|GCV_T| HM:PFM:REP 273->364|PF08669|1e-23|41.3|92/95|GCV_T_C| GO:PFM:NREP 3 GO:PFM GO:0004047|"GO:aminomethyltransferase activity"|PF01571|IPR006222| GO:PFM GO:0005737|"GO:cytoplasm"|PF01571|IPR006222| GO:PFM GO:0006546|"GO:glycine catabolic process"|PF01571|IPR006222| RP:SCP:NREP 2 RP:SCP:REP 8->276|1pj5A4|2e-67|29.7|266/315|d.250.1.1| RP:SCP:REP 308->371|1v5vA1|4e-15|35.9|64/89|b.44.2.1| HM:SCP:REP 7->290|1v5vA2|4.6e-99|53.2|282/0|d.250.1.1|1/1|Folate-binding domain| HM:SCP:REP 280->374|1vloA1|1.4e-23|43.5|92/100|b.44.2.1|1/1|Aminomethyltransferase beta-barrel domain| OP:NHOMO 1467 OP:NHOMOORG 851 OP:PATTERN 111-111111111111--------52223-12----------------------11111111111--- 121111-----11111111-1311211111113222114411111131-11-4532111111411472111-----------61----1111-111---1-211111111--------------11111111111111111---11111111122111111112111111111111111111111-1111111111111111111111111111111111111111111111-11111111111111111111-----------------------------------------------------------------------11--1111111-1--111----1---11----11-1-11111111-1--1-1211111111141221111112111231232223-222223213J2-95547577699A561115A53333EBK1111111121114111-----------------------------81131-112212222222211122362222122332321--11331111111112--112-21111111111111111-2-1111111111-1111111-1111121---------------------------1111-1-1411111111111111111111111--11112------11111111111111111-11-1111111111111111111111111111111111111111111111111-111111111111---111111111111112---------------------1111313333333663433144411111111111111-11111111111111111111111111-111111--------1-1-------------------------1111111111111 -1--11--421-11122222221222211111111111111-11111111222211211111111-11-111111-111111-11111-1312112111111111--2219343535121234355242Gh4166A-311622442232241163324525215321347224431111K1111121232211221114 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 362 STR:RPRED 97.3 SQ:SECSTR ########ccccTTGGGHHHHTcEEEEETTEEEEEEcccHHHHHHHHHHccEEEEcTTcEEEEEEcTTHHHHHHHHHcccGGGccTTEEEEEEEcTTTccEEEEEEEEEEETTEEEEEEcGGGHHHHHHHHHHHccccccEEEEcTTTEEEEEEEcTTHHHHHHHHcccccTTccTTcEEEEEETTEEEEEEccccccccEEEEEEEGGGHHHHHHHHHHHHHGGGTcEEEcHHHHHHHHHHTTccccTTTccTTccTTTTTcGGGccTTcccccTTHHHHHHHHHHccccEEEEEEEcccccccTTcEEEETTEEEEEEEEEEEETTTTEEEEEEEEEGGGccTTcEEEEEETTEEEEEEEEccccccc## DISOP:02AL 1-6, 371-372| PSIPRED cccccccccccccHHHHHHHcccEEEEcccEEcccccccHHHHHHHHHHcccEEEccccEEEEEEcHHHHHHHHccccccccccccccEEEEEEEcccccEEEEEEEEEEcccEEEEEEccccHHHHHHHHHHHHccccEEEEEccccEEEEEEEcHHHHHHHHHHHcccHHHcccccEEEEEEccccEEEEEcccccccccEEEEccHHHHHHHHHHHHHccHHcccccccHHHHHHHHHHcccccccccccccccHHHcccHHHcccccccccHHHHHHHHHHHccccEEEEEEEEccccccccccEEEEccEEEEEEEEccccccccccEEEEEEcccccccccEEEEEEcccEEEEEEEEcccccccc //