[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ56396.1
DDBJ      :             putative zinc proteinase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  567/915 : Eukaryota  182/199 : Viruses  1/175   --->[See Alignment]
d.185.1
:447 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->293 1bccA PDBj 1e-17 27.1 %
:RPS:PDB   24->432 3cwbN PDBj 3e-68 17.5 %
:RPS:SCOP  24->239 1q2lA4  d.185.1.1 * 6e-51 23.6 %
:RPS:SCOP  235->433 2fgeA3  d.185.1.1 * 2e-17 10.1 %
:HMM:SCOP  20->245 1bccB1 d.185.1.1 * 1.5e-54 38.4 %
:HMM:SCOP  250->448 1be3B2 d.185.1.1 * 3.1e-28 28.4 %
:RPS:PFM   35->177 PF00675 * Peptidase_M16 1e-22 44.9 %
:RPS:PFM   191->362 PF05193 * Peptidase_M16_C 2e-13 31.5 %
:HMM:PFM   193->371 PF05193 * Peptidase_M16_C 4.7e-27 29.9 174/183  
:HMM:PFM   37->173 PF00675 * Peptidase_M16 1.2e-22 28.4 134/149  
:BLT:SWISS 24->315 Y4WA_RHISN 4e-39 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56396.1 GT:GENE AAZ56396.1 GT:PRODUCT putative zinc proteinase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2779997..2781340) GB:FROM 2779997 GB:TO 2781340 GB:DIRECTION - GB:PRODUCT putative zinc proteinase GB:PROTEIN_ID AAZ56396.1 GB:DB_XREF GI:71916494 LENGTH 447 SQ:AASEQ MINMTSAEQGVEGLVTSNGAAGHIRQYRLDNGLRLVTAPAATGQVAAINLWYGVGSRHEVPGRTGFAHLFEHLMFEGSGNAAKGEHFRLIEALGGELNASTSSDRTNYYETVPEHALDLALWLEADRLATLRDGVTQEVLDNQRDVVKNERRQRYDNQPYGTAFERILAHAYPEGHPYHHPTIGSMEDLDAADLDYVLSFHKTHYGPDNLVLSVVSSLDSEDVYRRVEKYFGGIPPRETVAEAPDASLEGLLGSKSLVVEEQVPAPAVFIVHRIPPYGTREFDILHLASAVLGQGQGSRLYRRLVVERGLANDDGGASSDLFDFRYTQSLFFISMIARDGVSGSELENAIFEETAALADGISEEELERARAVLERDHFQGISTPAGLANALSGYTQLFDDPELVYTWPMRWASITPDEVVDCAKQYLIPENRFSLRYEVAPSETANA GT:EXON 1|1-447:0| BL:SWS:NREP 1 BL:SWS:REP 24->315|Y4WA_RHISN|4e-39|33.3|285/512| SEG 210->218|lvlsvvssl| SEG 363->375|eeeleraravler| BL:PDB:NREP 1 BL:PDB:REP 28->293|1bccA|1e-17|27.1|258/442| RP:PDB:NREP 1 RP:PDB:REP 24->432|3cwbN|3e-68|17.5|399/442| RP:PFM:NREP 2 RP:PFM:REP 35->177|PF00675|1e-22|44.9|136/145|Peptidase_M16| RP:PFM:REP 191->362|PF05193|2e-13|31.5|165/180|Peptidase_M16_C| HM:PFM:NREP 2 HM:PFM:REP 193->371|PF05193|4.7e-27|29.9|174/183|Peptidase_M16_C| HM:PFM:REP 37->173|PF00675|1.2e-22|28.4|134/149|Peptidase_M16| GO:PFM:NREP 5 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF00675|IPR011765| GO:PFM GO:0006508|"GO:proteolysis"|PF00675|IPR011765| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF05193|IPR007863| GO:PFM GO:0006508|"GO:proteolysis"|PF05193|IPR007863| GO:PFM GO:0008270|"GO:zinc ion binding"|PF05193|IPR007863| RP:SCP:NREP 2 RP:SCP:REP 24->239|1q2lA4|6e-51|23.6|212/240|d.185.1.1| RP:SCP:REP 235->433|2fgeA3|2e-17|10.1|188/268|d.185.1.1| HM:SCP:REP 20->245|1bccB1|1.5e-54|38.4|216/0|d.185.1.1|1/2|LuxS/MPP-like metallohydrolase| HM:SCP:REP 250->448|1be3B2|3.1e-28|28.4|194/0|d.185.1.1|2/2|LuxS/MPP-like metallohydrolase| OP:NHOMO 1287 OP:NHOMOORG 752 OP:PATTERN -----------------1---1---------------------------------------------- 238-2---------1------1----------11111111122211111111111111--331-2222222-----------1111112232-2221--113-4321422---------------1--1-112131---221112254424442222111111442455531111111111111111111-1111111111111111111111111111111111------12-------------------------------11---------------------------------------------------------111-3222222222211332111121--2--1111111111111111-11612344311111233232232222222231133123-33333232222121111222221122213222222222222222222122212322222222222--11111111111112222-2222311111------------------------22221111111211211111112111111-------1111113211-1-212122114343333348859852312211111111111111111111111122-3113112-5333322344434134344---1111-----------1----------------------------------11-------------------1---------1--------------311111111111112---1-----------11111121112-11111111222222111111111111122233333322422111111111111111-11222222-------------------------------------112111111141 -112211-321--11112111121111111111-11222212211112111222111121111111121111111111-111111111-21211111211111224-12-226222611--12-2412-3B2-353121122232121-12212-32211132-111342122312321C1112212221321131211 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 430 STR:RPRED 96.2 SQ:SECSTR #####cEEEEcccccccTTcccEcEEEEcTTccEEEEEEcTcccEEEEEEcccccGGGccTTcTTHHHHHHHHTTcccccccHHHHHHHHHTTTcEEEEEEccccEEEEEEEEGGGHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHTTTTccTTccccccHHHHHHccHHHHHHHHHHHccGGGcEEEEEEcccHHHHHHHHHHHcccccccGGGGccccccccccccEEEEEEcTTcccEEEEEEEEcccTTcTHHHHHHHHHHHHccGGcccHHHHHHHHTTcccEEEEEEEEEEEEEccccEEEEEEEEEcTTTHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHTTTcccEEE############ DISOP:02AL 1-6, 439-440, 442-447| PSIPRED ccccccHHHHHHHHHccccccccEEEEEccccEEEEEEEcccccEEEEEEEEEccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccEEEccEEEEEEEEEcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccHHHHHcccHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccEEcccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHcccccEEEEEEEEcccccccc //