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Thermobifida fusca YX (tfus0)
Gene : AAZ56411.1
DDBJ      :             dihydroorotate oxidase B, electron transfer subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.1.5
:407 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  72->170 1g0dA2  b.1.5.1 * 8e-07 12.0 %
:RPS:PFM   52->163 PF06030 * DUF916 7e-06 28.2 %
:HMM:PFM   64->163 PF06030 * DUF916 2.6e-06 21.0 100/122  
:HMM:PFM   289->363 PF06864 * PAP_PilO 0.00011 21.1 71/414  
:BLT:SWISS 255->303 PRP8_DICDI 3e-04 45.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56411.1 GT:GENE AAZ56411.1 GT:PRODUCT dihydroorotate oxidase B, electron transfer subunit GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2800231..2801454) GB:FROM 2800231 GB:TO 2801454 GB:DIRECTION - GB:PRODUCT dihydroorotate oxidase B, electron transfer subunit GB:PROTEIN_ID AAZ56411.1 GB:DB_XREF GI:71916509 LENGTH 407 SQ:AASEQ MSAIRSSRIARLGVVGLLLYALTTPAPALADPSPDNNSAPSPAARAEQDFRWSVAPSNENGELGRSYFVHDVKPGQTIEDWVAITNYGEEPMTFSVYGTDAFNTPDGSFALLPADEEPALAGTWIEIPREDQTVEVKGGETRVIPFTITVPDNAEPGDHAAGVIASVSHDALNAQGQLVRVDRRIAARVYLRVDGPVRPSLHIDAIRTDYQAPPWWNPFATGEVTITYQVRNAGNLRLTASGEAGAAGPFGVGLGDPVHKDVPEMLPGTVYEYTHTIPDIYPLFWINGEVTLTPQAAPQSAQTPDLHPVTRGDSVIAIPWLPVLAAILLTAVLIWRRRHAKRRFQAAVAAAVAEARKQDAAHQGAPQTTAAEAPADPTTDSPEQQPDSAAHQGGSANEQTEPEEPRS GT:EXON 1|1-407:0| BL:SWS:NREP 1 BL:SWS:REP 255->303|PRP8_DICDI|3e-04|45.5|44/100| TM:NTM 2 TM:REGION 2->24| TM:REGION 312->334| SEG 17->44|lllyalttpapaladpspdnnsapspaa| SEG 110->121|allpadeepala| SEG 321->334|lpvlaailltavli| SEG 340->361|akrrfqaavaaavaearkqdaa| SEG 365->382|apqttaaeapadpttdsp| RP:PFM:NREP 1 RP:PFM:REP 52->163|PF06030|7e-06|28.2|110/122|DUF916| HM:PFM:NREP 2 HM:PFM:REP 64->163|PF06030|2.6e-06|21.0|100/122|DUF916| HM:PFM:REP 289->363|PF06864|0.00011|21.1|71/414|PAP_PilO| RP:SCP:NREP 1 RP:SCP:REP 72->170|1g0dA2|8e-07|12.0|83/109|b.1.5.1| OP:NHOMO 13 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ----2----------------------------------------11-------------11--3--2-11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-8, 35-37, 298-302, 354-407| PSIPRED cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHccEEEEEccccccccccccEEEEEcccccEEEEEEEEcccccEEEEEEEccccccccccccEEccccccccccHHHHcccccccEEEEccccEEEEEEEEEEccccccccEEEEEEEEccccccccccEEEEEEEEEEEEEEEEEcccccccHHHEEEEccccccccccccccccEEEEEEEEEcccEEEEEEEEEEEcccccccccccccccccccccccEEEEEccccccccEEEEEEEEEEcccccccccccccccEEccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccc //