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Thermobifida fusca YX (tfus0)
Gene : AAZ56418.1
DDBJ      :             FecCD-family membrane transport protein
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  644/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:367 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   68->358 2nq2B PDBj 6e-30 30.7 %
:RPS:SCOP  73->358 1l7vA  f.22.1.1 * 7e-60 31.1 %
:HMM:SCOP  18->359 1l7vA_ f.22.1.1 * 3.5e-82 40.4 %
:RPS:PFM   77->358 PF01032 * FecCD 4e-51 46.2 %
:HMM:PFM   41->358 PF01032 * FecCD 7.4e-97 42.1 309/311  
:BLT:SWISS 82->359 BTUC_VIBVU 6e-44 35.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56418.1 GT:GENE AAZ56418.1 GT:PRODUCT FecCD-family membrane transport protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2808149..2809252) GB:FROM 2808149 GB:TO 2809252 GB:DIRECTION - GB:PRODUCT FecCD-family membrane transport protein GB:PROTEIN_ID AAZ56418.1 GB:DB_XREF GI:71916516 LENGTH 367 SQ:AASEQ MTLAAKQADPLPASRPDSTQVRRATVLRGTVLLTVLAIALGAVALVAAGIGAYHIPPLEVAGSVFRGLGLDWGEAADPLADEVLWNVRFPRVVLAMIVGSSLALAGAMMQGIFGNPLAEPGVIGVSSGATVGAVLIIALGASALGYWTVIVASFLSGMVTTVLVYVLSRSGGRTEVVTLLLTGIAVNAVAGALIGAATYFSEDAELRSITNWQMGSLAAATWFKVAAALPLAVAGIIAAPFFARRLDLLSLGESPARHLGVDVERMRQALIVVIAMLTSSAVAFAGIISFVGLVVPHMVRMIAGPGHRVLLPASVLGGALVLVAADLVARVAAAPQEVPLGIITALVGGPFFFWLLYRTRARQGGWA GT:EXON 1|1-367:0| BL:SWS:NREP 1 BL:SWS:REP 82->359|BTUC_VIBVU|6e-44|35.1|276/331| TM:NTM 9 TM:REGION 26->48| TM:REGION 89->111| TM:REGION 120->142| TM:REGION 148->170| TM:REGION 177->199| TM:REGION 217->239| TM:REGION 276->298| TM:REGION 311->333| TM:REGION 337->358| SEG 21->52|vrratvlrgtvlltvlaialgavalvaagiga| SEG 309->334|vllpasvlggalvlvaadlvarvaaa| BL:PDB:NREP 1 BL:PDB:REP 68->358|2nq2B|6e-30|30.7|280/300| RP:PFM:NREP 1 RP:PFM:REP 77->358|PF01032|4e-51|46.2|279/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 41->358|PF01032|7.4e-97|42.1|309/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 73->358|1l7vA|7e-60|31.1|283/324|f.22.1.1| HM:SCP:REP 18->359|1l7vA_|3.5e-82|40.4|324/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 2537 OP:NHOMOORG 697 OP:PATTERN --2-1--11111111----1-112233313211--321212131164854C81-2221342111---- ----255588A6651-1----1---3----------3A24-1131221333-7312152224-786225E3--------1221-----32221222---1-11111122----------------13122111223144221137-6-2222-11--------42-1451-------------2322212-168CCDCDBCC6DCDDDC98AABBDDD477B755444444GG266655666666666533564-1----1---33-1--2-----1112323232111222222222223333333333333222111222223B4699998995B6242227563511-521-2CA2--312223222-5141-1--122122211--1235544433333333337-21-11112222-77774535767441121239222232-22222222-332--42------------------------------11--1122223444442333333113333235211111--111-2111413-1211111-1421111111--1-11-6622212313111----1---2411-121341243-22222----------111--22563231112211233121321131233322---1121------G578287688A699964-768488A4867A8666664AABAB7755355555555555555844855563-777777767777--2-----------174C332364--1111--5--11-11-342125222525323221466---------154556666685A3311---------------111------------5-1----------------------1121121122222-11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 79.3 SQ:SECSTR ###################################################################HHHTccTTccccccccGGGTcHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTTcccHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHTccHHTccHHHHHHHHHHHHHHHHHHHHHHHTccTTTHHHHHHHHccccTTccHHHHHHHHHHHHHHHHHHHHTTTGGGGGGccHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHccccccTTTHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHTc######### DISOP:02AL 1-20, 362-367| PSIPRED ccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //