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Thermobifida fusca YX (tfus0)
Gene : AAZ56419.1
DDBJ      :             binding-protein-dependent transport lipoprotein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  276/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.92.2
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->346 2r7aB PDBj 2e-32 32.7 %
:RPS:PDB   92->346 1efdN PDBj 7e-42 16.1 %
:RPS:SCOP  92->346 1efdN  c.92.2.1 * 3e-42 16.1 %
:HMM:SCOP  89->346 1n2zA_ c.92.2.2 * 7.4e-48 31.2 %
:RPS:PFM   93->320 PF01497 * Peripla_BP_2 1e-13 30.4 %
:HMM:PFM   96->322 PF01497 * Peripla_BP_2 3.1e-36 22.8 224/238  
:BLT:SWISS 92->349 HMUT_YERPE 3e-36 35.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56419.1 GT:GENE AAZ56419.1 GT:PRODUCT binding-protein-dependent transport lipoprotein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2809249..2810316) GB:FROM 2809249 GB:TO 2810316 GB:DIRECTION - GB:PRODUCT binding-protein-dependent transport lipoprotein GB:PROTEIN_ID AAZ56419.1 GB:DB_XREF GI:71916517 LENGTH 355 SQ:AASEQ MPSHPSPQHRMRRILKHSAVLLLTLLAALTACSAPASDDDSIPSLEENRLQPLEGEAHPSLPVTVDSVVPVANRTADTPLTYEQVEVTDVSRILPLNGGVAEIIYTLGLGDNVIGRDSTATFAEAEDLPVVTQGHDISVEGVLSLNPTLVIADTWTGPYEAIEQLRDSGVTLVILDEVWSLDGMYTRITEVAEMLGVPERGEQLVQRVQDQMAEVRDSLPESLRGSRVAFLYLRGSAGVYLLGGPGSGADALVAELGLEDAGTAIGLDRAFTPITSEALIDAQPDILLVMTGGLKSVGGIDGLLKIPGISQTPAGKERRVLAYEDGLLLGFGPRTPQVLKAMAEDLIAMHEGEAQ GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 92->349|HMUT_YERPE|3e-36|35.1|248/279| SEG 18->41|savllltllaaltacsapasddds| BL:PDB:NREP 1 BL:PDB:REP 92->346|2r7aB|2e-32|32.7|248/256| RP:PDB:NREP 1 RP:PDB:REP 92->346|1efdN|7e-42|16.1|249/262| RP:PFM:NREP 1 RP:PFM:REP 93->320|PF01497|1e-13|30.4|224/235|Peripla_BP_2| HM:PFM:NREP 1 HM:PFM:REP 96->322|PF01497|3.1e-36|22.8|224/238|Peripla_BP_2| GO:PFM:NREP 2 GO:PFM GO:0005381|"GO:iron ion transmembrane transporter activity"|PF01497|IPR002491| GO:PFM GO:0006827|"GO:high-affinity iron ion transport"|PF01497|IPR002491| RP:SCP:NREP 1 RP:SCP:REP 92->346|1efdN|3e-42|16.1|249/262|c.92.2.1| HM:SCP:REP 89->346|1n2zA_|7.4e-48|31.2|240/0|c.92.2.2|1/1|"Helical backbone" metal receptor| OP:NHOMO 300 OP:NHOMOORG 283 OP:PATTERN -------------------------11--1-------------1-212-------------------- -----111111111----------------------1121-----1-----1-----1--11-12---121----------------------------------1-11------------------1---1----11111-------------------------1-1--------------12111----11---------------121111---1111------1---21111111111111111--111----------------------------------------------------------------------11--111111111-----1111111--1--------------211-----------11111-11---1111111----------1--1-1--11111-11112111111111---111----11-11111111------1------------------------------------1111-111111-111111--1111-11-----1------2---1----2----1-1-1-----------------------------------------2------1-----------------------11-1---111--11111111--1-1111-1-------------2-11111-111-111---1---111-1-111------11112111----------------1--1----1-311111111111--1------------1-1----1------1--1---------1--11111--111111--------------1111111111111111----------------11-----------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 287 STR:RPRED 80.8 SQ:SECSTR ####################################################################cccEEEEcccEEEEEEEEETTcccEEEccHHHHHHHHHHHTTccccEEccHHHHcccTTcEEccccccccHHHHHHHcccEEEEETTccccHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHGGGGcccccccEEcEEEEEEETTEEEEEcTTcTTHHHHHHTTccccccccccTTcEEEEcGGGGGGccccEEEEEccccHHHHHHHHHHTcHHHHHcHHHHTTcEEEEccccTTccHHHHHHHHHHHHHHHHHHHHcccc DISOP:02AL 1-11, 33-55, 351-355| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEcccccccccccccccccEEccccccEEEEcccHHHHHHHHHcccccEEEEccHHHcHHHHccccccccccccHHHHHHccccEEEEEcccccHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccEEEEEcccccHHHHHHHHcccccHHHcccccccccccHHHHHHHcccEEEEEccccccHHHHHHHHHccHHHcccHHHcccEEEEccccHHcccHHHHHHHHHHHHHHHHHHHcccc //