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Thermobifida fusca YX (tfus0)
Gene : AAZ56432.1
DDBJ      :             3-hydroxyacyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  559/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.2.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->284 1f12B PDBj 1e-44 39.2 %
:BLT:PDB   305->361 1f12B PDBj 1e-08 47.4 %
:RPS:PDB   7->43 2aejB PDBj 1e-04 8.1 %
:RPS:PDB   53->286 1e9yA PDBj 7e-30 13.8 %
:RPS:PDB   316->364 3ctvA PDBj 3e-09 29.2 %
:RPS:SCOP  4->183 2b0jA2  c.2.1.6 * 3e-20 7.8 %
:RPS:SCOP  188->284 1f0yA1  a.100.1.3 * 4e-17 34.0 %
:RPS:SCOP  316->360 1f0yA1  a.100.1.3 * 8e-08 51.1 %
:HMM:SCOP  1->187 1f0yA2 c.2.1.6 * 6.2e-59 52.7 %
:HMM:SCOP  188->285 3hdhA1 a.100.1.3 * 6.8e-31 50.0 %
:HMM:SCOP  304->394 1wdkA2 a.100.1.3 * 1.9e-12 43.2 %
:RPS:PFM   7->185 PF02737 * 3HCDH_N 6e-45 53.6 %
:RPS:PFM   188->282 PF00725 * 3HCDH 4e-11 37.9 %
:RPS:PFM   312->351 PF00725 * 3HCDH 2e-06 47.5 %
:HMM:PFM   7->185 PF02737 * 3HCDH_N 3.6e-66 51.4 179/180  
:HMM:PFM   188->284 PF00725 * 3HCDH 7.2e-35 51.5 97/97  
:HMM:PFM   316->393 PF00725 * 3HCDH 9.6e-13 35.1 77/97  
:BLT:SWISS 5->285 HBD_CLOAB 5e-62 43.1 %
:BLT:SWISS 305->361 HCDH_HUMAN 4e-08 47.4 %
:REPEAT 2|180->229|298->351
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56432.1 GT:GENE AAZ56432.1 GT:PRODUCT 3-hydroxyacyl-CoA dehydrogenase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2821183..2822379) GB:FROM 2821183 GB:TO 2822379 GB:DIRECTION - GB:PRODUCT 3-hydroxyacyl-CoA dehydrogenase GB:PROTEIN_ID AAZ56432.1 GB:DB_XREF GI:71916530 LENGTH 398 SQ:AASEQ MVEEINKVGVVGLGTMGAGIVEVFARAGFTVTGVEIDDAALERGRTHLEKSLAKAVAKGKLTEDEQRAILGRVTFTTSRDDLADAHLAVEAVPERLDIKRSVFADLDRILPPAAILATNTSSLSVTEIAALTSRPGKVIGLHFFNPAPVMRLVEIVTTVVTEPHVRETATQVVTRLGKTPVAVGDRAGFVANALLVPYLNHAVAVYEQGLATREQIDAAITSAAGFPMGPLTLMDLVGLDVLLDVMDVLWDEFRRPRYAAAPLLRRMVAAGLLGRKSGRGFYDYSGADNPAEPEPTAPLAQLVGDGPGQISLADLLLVPHLNDAARMIGDGYATADDVDTAMRLGCGYPKGLAAMLDERGVKNVTETLAELAAAGLFTDDTAPLLTMLAKQGKDTLRS GT:EXON 1|1-398:0| BL:SWS:NREP 2 BL:SWS:REP 5->285|HBD_CLOAB|5e-62|43.1|281/282| BL:SWS:REP 305->361|HCDH_HUMAN|4e-08|47.4|55/314| NREPEAT 1 REPEAT 2|180->229|298->351| SEG 231->249|ltlmdlvgldvlldvmdvl| SEG 254->266|rrpryaaapllrr| SEG 365->374|tetlaelaaa| BL:PDB:NREP 2 BL:PDB:REP 5->284|1f12B|1e-44|39.2|278/291| BL:PDB:REP 305->361|1f12B|1e-08|47.4|55/291| RP:PDB:NREP 3 RP:PDB:REP 7->43|2aejB|1e-04|8.1|37/220| RP:PDB:REP 53->286|1e9yA|7e-30|13.8|225/238| RP:PDB:REP 316->364|3ctvA|3e-09|29.2|48/90| RP:PFM:NREP 3 RP:PFM:REP 7->185|PF02737|6e-45|53.6|179/180|3HCDH_N| RP:PFM:REP 188->282|PF00725|4e-11|37.9|95/97|3HCDH| RP:PFM:REP 312->351|PF00725|2e-06|47.5|40/97|3HCDH| HM:PFM:NREP 3 HM:PFM:REP 7->185|PF02737|3.6e-66|51.4|179/180|3HCDH_N| HM:PFM:REP 188->284|PF00725|7.2e-35|51.5|97/97|3HCDH| HM:PFM:REP 316->393|PF00725|9.6e-13|35.1|77/97|3HCDH| GO:PFM:NREP 6 GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF02737|IPR006176| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02737|IPR006176| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| RP:SCP:NREP 3 RP:SCP:REP 4->183|2b0jA2|3e-20|7.8|179/242|c.2.1.6| RP:SCP:REP 188->284|1f0yA1|4e-17|34.0|97/99|a.100.1.3| RP:SCP:REP 316->360|1f0yA1|8e-08|51.1|45/99|a.100.1.3| HM:SCP:REP 1->187|1f0yA2|6.2e-59|52.7|186/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 188->285|3hdhA1|6.8e-31|50.0|98/99|a.100.1.3|1/2|6-phosphogluconate dehydrogenase C-terminal domain-like| HM:SCP:REP 304->394|1wdkA2|1.9e-12|43.2|88/95|a.100.1.3|2/2|6-phosphogluconate dehydrogenase C-terminal domain-like| OP:NHOMO 2313 OP:NHOMOORG 758 OP:PATTERN 11-1--4655655544-111121A42231-2411---------------------------2331-11 243391-4--123263333-322237333333332356AA245522231311323434--447-7569A82-----1111--4---------1-11---3-232242332------------------------1-11111---311--1-------------------1-------------33322---3222222222332232222422322223442321------43111111111111111211-2--1----1-----11---1-------1111---------------------------------------2-1122111111111211222111-1-314112-651417-24---1--1-4-16332-----336553223333434443343444-22722825663-433233432343572223484344448--------3---1342------------------1--1--1----12282-49848887778556668866666657B7E59672355455555655686113----23-------1119542845-1---------34314-21-33335412---------------------------22-321224322222222222223222223---22--------3222-223223333243-233322242322222322344422322222222222222222251222222--222222222222---2111113333-2422111--------1---55535333326-66654653454574112111111111-222222222222222222222223------11--1111--------1---------------------------------------- ----115-631-222243143345745111111111122222211111244445112224441--------------------------12141113222222222-584A7644453323344322549T4-555223233352233214316345365992B533525-7B732221H1112245842333363334 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 392 STR:RPRED 98.5 SQ:SECSTR HHHHHHEEEEEcccHHHHHHHHHHHHTTccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHTcccHHHHHHHGGGcccTTTccTTHHHHccEEEEEEEETTEEEEEEEEcccccccccTTccccccccTTTTccccEEEEEEcccccEEEETccGGGccTTEEccGGGGTHHHHTTcccTEEEcccTTcEEEEcTTcEEEEEEEEccTTcEEccTTccccEccHHHHHHHHHHHHHHTcTTccccccccccccHHTccccccHHHHHHHHTTHHHHHHHHHHTTccHHHHHHHHTTccHHHHcccTTTTTcTTTccccHHHHHHHHcHHHHHHHHHHTGGGcGGGcccHHHHHH#HHTTc##### DISOP:02AL 1-2, 58-63, 396-398| PSIPRED ccccccEEEEEEccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHcccHHcEEEEccccccccccHHEEcccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccEEEEEccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccc //