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Thermobifida fusca YX (tfus0)
Gene : AAZ56450.1
DDBJ      :             translation factor SUA5
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  793/915 : Eukaryota  140/199 : Viruses  0/175   --->[See Alignment]
d.115.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->212 2eqaA PDBj 1e-26 34.6 %
:RPS:PDB   1->101 3c9dA PDBj 9e-11 9.9 %
:RPS:PDB   125->213 2e6gH PDBj 2e-14 14.1 %
:RPS:SCOP  7->212 1jcuA  d.115.1.1 * 4e-45 29.2 %
:HMM:SCOP  2->212 1jcuA_ d.115.1.1 * 5.2e-56 38.9 %
:RPS:PFM   24->197 PF01300 * Sua5_yciO_yrdC 2e-25 43.1 %
:HMM:PFM   24->197 PF01300 * Sua5_yciO_yrdC 2.1e-49 40.2 174/179  
:BLT:SWISS 1->215 Y1301_MYCTU 5e-64 54.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56450.1 GT:GENE AAZ56450.1 GT:PRODUCT translation factor SUA5 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2837268..2838047) GB:FROM 2837268 GB:TO 2838047 GB:DIRECTION - GB:PRODUCT translation factor SUA5 GB:PROTEIN_ID AAZ56450.1 GB:DB_XREF GI:71916548 InterPro:IPR004388 LENGTH 259 SQ:AASEQ MSRRYDCADDEQRKAGIADAASTVRRGELVVLPTDTVYGVGADAFNPAAVTALRNAKQRGREHPPAVLVGTVRAAQALIDDLGKYGQDLIEEFWPGPLTLVCAATPSLSWDLGDTKGTVAVRMPMHPVALELLKEVGPMAVSGANVTGKPAATTVEEAETQFGDAVSVYLDAGPCTSTPPSTIVDLTYAVPRVLRSGAITLEQLRSVCGTVIAELKRPEREPKTSNRETPRTAEPEATSASDEGDSGIPPAQKDDSDAP GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 1->215|Y1301_MYCTU|5e-64|54.0|215/217| BL:PDB:NREP 1 BL:PDB:REP 20->212|2eqaA|1e-26|34.6|191/327| RP:PDB:NREP 2 RP:PDB:REP 1->101|3c9dA|9e-11|9.9|101/208| RP:PDB:REP 125->213|2e6gH|2e-14|14.1|85/229| RP:PFM:NREP 1 RP:PFM:REP 24->197|PF01300|2e-25|43.1|174/178|Sua5_yciO_yrdC| HM:PFM:NREP 1 HM:PFM:REP 24->197|PF01300|2.1e-49|40.2|174/179|Sua5_yciO_yrdC| RP:SCP:NREP 1 RP:SCP:REP 7->212|1jcuA|4e-45|29.2|202/208|d.115.1.1| HM:SCP:REP 2->212|1jcuA_|5.2e-56|38.9|208/208|d.115.1.1|1/1|YrdC/RibB| OP:NHOMO 1177 OP:NHOMOORG 1000 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111-11 2221111111111111111-11111111111111111211111111211111121111113212111111211111111111-----1111111111---2221121112111111111111111111111111111111111111232222222111-1--133112222---1111--1-1-1-1111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111-11-11-11111-1111112111111111-111111111111111111111111111111111111111111111111-111111111111122212222222111122221111122222212-122211111111121121221-1---1-1-1221212122221111-1111111111111122121222-------------------------33--21121211-2111111111111111111---2211------112211-1111111111-1111111111111111111111212221111111111111111211111111-222222212222-11-222222222221--11---1------22-22222221112111112121321222111---------111112222212122-1-11111111111--21111111131111111-11111---1--------------1-11111111111111 --1111--211111121111111111111111111111-11-11-111111111--1--111111111-1-11111111111111111-1211111---11211111121732322-1----------------------1------1-----1121131221221111111-12111-111-----111-12121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 213 STR:RPRED 82.2 SQ:SECSTR EEEEEcccTTTcccEEEEEEEEEEcccEEEEccccccccGGGTTTcTTTcccTTcHHHHHHHHHHHTcHHHHTcTTcccTTHHHHHHHHHHTHHHHHHHHHEEEcTTccHHHHTTccEEEEEccHHHHHHHHTTccEEEcEEcccccccccEEEEEcccccTTcccEEEEEccHHccccHHHHHHHHHcccccEEEEEEEEccccGGGHHHHH############################################## DISOP:02AL 214-230, 250-259| PSIPRED ccEEEEcccccccHHHHHHHHHHHHcccEEEEEccccEEEEEccccHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHccHHHHHHHHHHccccEEEEEEccccccHHHcccccEEEEEccccHHHHHHHHHHcccEEEccccccccccccHHHHHHHHcccEEEEEcccccccccccEEEEEccccEEEEEcccccHHHHHHHccccccccccccccccccccccccccccccEEEEEEcccccccccccccccc //