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Thermobifida fusca YX (tfus0)
Gene : AAZ56482.1
DDBJ      :             tRNA/rRNA methyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  67/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.116.1
:227 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->195 1x7pA PDBj 8e-04 25.9 %
:RPS:PDB   79->205 3e5yA PDBj 3e-18 23.0 %
:RPS:SCOP  69->205 1ipaA1  c.116.1.1 * 2e-24 20.0 %
:HMM:SCOP  54->225 1v2xA_ c.116.1.1 * 3.8e-39 30.8 %
:RPS:PFM   78->205 PF00588 * SpoU_methylase 4e-11 40.7 %
:HMM:PFM   79->215 PF00588 * SpoU_methylase 8.5e-26 24.4 135/142  
:BLT:SWISS 57->205 Y5337_MYCVP 5e-09 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56482.1 GT:GENE AAZ56482.1 GT:PRODUCT tRNA/rRNA methyltransferase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 2876654..2877337 GB:FROM 2876654 GB:TO 2877337 GB:DIRECTION + GB:PRODUCT tRNA/rRNA methyltransferase GB:PROTEIN_ID AAZ56482.1 GB:DB_XREF GI:71916580 InterPro:IPR001537 LENGTH 227 SQ:AASEQ MGPKLNRVSEQVVPPSSDSPPPPDRTEVGVGPWEGPWPEGDHYDPELLKNGDRRNVVDRYRYWRREAIVADLDRRRHPFHVAIENWEHDFNIGSVVRTANAFAARAVHIVGRRRWNRRGAMVTDRYQHIHHHPDTASLVAWAEAHDLPLIGIDNLPGSVPLETYPLPRECVLVFGQEGPGLSEEVRKVCVSVLSIAQFGSTRSINAGAAAAVAMHAWIRAHVFHQSV GT:EXON 1|1-227:0| BL:SWS:NREP 1 BL:SWS:REP 57->205|Y5337_MYCVP|5e-09|31.3|147/314| SEG 14->24|ppssdsppppd| SEG 27->40|evgvgpwegpwpeg| SEG 206->220|agaaaavamhawira| BL:PDB:NREP 1 BL:PDB:REP 45->195|1x7pA|8e-04|25.9|147/265| RP:PDB:NREP 1 RP:PDB:REP 79->205|3e5yA|3e-18|23.0|126/156| RP:PFM:NREP 1 RP:PFM:REP 78->205|PF00588|4e-11|40.7|113/143|SpoU_methylase| HM:PFM:NREP 1 HM:PFM:REP 79->215|PF00588|8.5e-26|24.4|135/142|SpoU_methylase| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 1 RP:SCP:REP 69->205|1ipaA1|2e-24|20.0|135/158|c.116.1.1| HM:SCP:REP 54->225|1v2xA_|3.8e-39|30.8|169/191|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 79 OP:NHOMOORG 73 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-11111111111111112111----11111111111111--1111-11--111111111---------------------------1---1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------6-11-----1-1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 161 STR:RPRED 70.9 SQ:SECSTR ############################################HHHHccccccccccccEEETcEEEEEEcccEEcTcEEEEEccccHHHHHHHHHHHHHHTcEEEEEccccHHHHHTTccHHHHHTcEEEccHHHHHHHHcccGGGEEEEcccTTcEEGGGccccTTcEEEEEcTTTcccHHHTccGGGEEEccccccccccc###################### DISOP:02AL 1-6, 8-27, 226-227| PSIPRED ccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccEEEEEEccccccccEEEcccccEEEEEccccccccHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccc //