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Thermobifida fusca YX (tfus0)
Gene : AAZ56489.1
DDBJ      :             Small GTP-binding protein domain:GTP-binding protein TypA
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
b.43.3c.37.1d.58.11
:650 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->305 3degC PDBj 9e-32 36.4 %
:BLT:PDB   345->641 3e3xA PDBj 3e-57 52.3 %
:RPS:PDB   50->600 3cb4D PDBj 2e-57 20.8 %
:RPS:SCOP  37->200 1n0uA2  c.37.1.8 * 7e-39 34.4 %
:RPS:SCOP  215->294 1n0uA1  b.43.3.1 * 2e-08 20.0 %
:RPS:SCOP  345->431 1fnmA4  d.58.11.1 * 3e-11 33.8 %
:RPS:SCOP  442->550 1n0uA5  d.58.11.1 * 2e-25 17.8 %
:HMM:SCOP  33->263 1f60A3 c.37.1.8 * 8.4e-56 39.3 %
:HMM:SCOP  189->343 1n0uA1 b.43.3.1 * 3.9e-31 38.5 %
:HMM:SCOP  345->431 1wdtA5 d.58.11.1 * 3.3e-15 36.4 %
:HMM:SCOP  442->557 1n0uA5 d.58.11.1 * 3.4e-33 43.1 %
:RPS:PFM   37->178 PF00009 * GTP_EFTU 6e-28 48.2 %
:RPS:PFM   442->518 PF00679 * EFG_C 4e-10 39.0 %
:RPS:PFM   584->644 PF10455 * BAR_2 8e-04 36.1 %
:HMM:PFM   38->238 PF00009 * GTP_EFTU 1.3e-52 41.0 183/189  
:HMM:PFM   440->524 PF00679 * EFG_C 6.5e-25 37.6 85/89  
:HMM:PFM   262->332 PF03144 * GTP_EFTU_D2 3.1e-12 31.0 71/74  
:BLT:SWISS 37->635 TYPA_BACSU e-158 50.5 %
:PROS 77->92|PS00301|EFACTOR_GTP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56489.1 GT:GENE AAZ56489.1 GT:PRODUCT Small GTP-binding protein domain:GTP-binding protein TypA GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2886239..2888191) GB:FROM 2886239 GB:TO 2888191 GB:DIRECTION - GB:PRODUCT Small GTP-binding protein domain:GTP-binding protein TypA GB:PROTEIN_ID AAZ56489.1 GB:DB_XREF GI:71916587 InterPro:IPR000795 InterPro:IPR005225 InterPro:IPR006298 LENGTH 650 SQ:AASEQ MAGGRGSRGAPSVFPQHDRDFRMPTATTAHNTARRTDLRNIAIVAHVDHGKTTLVDAMLWQSGAFRANQDVDERVMDSGDLEREKGITILAKNTAVRYTTPAGENIVINIVDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAAQLPVILVINKVDRPDSRIAEVVDDTYELFLDLDATEEQIDFPIVYACAREGRASLTRPADGSLPDSDTLEPLFTTILDTIPAPAYTPGAPLQAHVTNLDASPFLGRLALCRVHQGEIRKGQQVAWIRTDGSIEHVKVTELFLTEALDRKPAEKAGPGDIIAIAGIPDIMIGETLADPADPRPLPPITVDEPAISMTIGTNTSPLVGRVKGAKVTARLVKERLDRELVGNVSLRVLPTDRPDTWEVQGRGELALAILVEQMRREGYELTVGKPQVVTKVIDGQVHEPVERLTVDIPEEYLGAVTQLLNIRKGRMETMTNHGTGWVRMDWTVPSRGLIGFRTEFLTETRGTGIAHHVFDGYAPWFGELRTRATGSLVADRSGKATAYAMFGLQERGTLFVEPGTEVYEGMVVGENSRADDIDVNITKERKVSNVRSSTAEELERLSPPRKLSLEEALEFCREDECVEVTPEAVRIRKVILDQKERARILAHRKRR GT:EXON 1|1-650:0| BL:SWS:NREP 1 BL:SWS:REP 37->635|TYPA_BACSU|e-158|50.5|588/612| PROS 77->92|PS00301|EFACTOR_GTP|PDOC00273| SEG 25->36|tattahntarrt| SEG 311->328|agpgdiiaiagipdimig| SEG 331->342|ladpadprplpp| BL:PDB:NREP 2 BL:PDB:REP 37->305|3degC|9e-32|36.4|242/545| BL:PDB:REP 345->641|3e3xA|3e-57|52.3|266/267| RP:PDB:NREP 1 RP:PDB:REP 50->600|3cb4D|2e-57|20.8|491/525| RP:PFM:NREP 3 RP:PFM:REP 37->178|PF00009|6e-28|48.2|137/183|GTP_EFTU| RP:PFM:REP 442->518|PF00679|4e-10|39.0|77/88|EFG_C| RP:PFM:REP 584->644|PF10455|8e-04|36.1|61/280|BAR_2| HM:PFM:NREP 3 HM:PFM:REP 38->238|PF00009|1.3e-52|41.0|183/189|GTP_EFTU| HM:PFM:REP 440->524|PF00679|6.5e-25|37.6|85/89|EFG_C| HM:PFM:REP 262->332|PF03144|3.1e-12|31.0|71/74|GTP_EFTU_D2| GO:PFM:NREP 3 GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00679|IPR000640| RP:SCP:NREP 4 RP:SCP:REP 37->200|1n0uA2|7e-39|34.4|154/323|c.37.1.8| RP:SCP:REP 215->294|1n0uA1|2e-08|20.0|80/138|b.43.3.1| RP:SCP:REP 345->431|1fnmA4|3e-11|33.8|77/79|d.58.11.1| RP:SCP:REP 442->550|1n0uA5|2e-25|17.8|107/114|d.58.11.1| HM:SCP:REP 33->263|1f60A3|8.4e-56|39.3|211/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 189->343|1n0uA1|3.9e-31|38.5|130/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 345->431|1wdtA5|3.3e-15|36.4|77/0|d.58.11.1|1/1|EF-G C-terminal domain-like| HM:SCP:REP 442->557|1n0uA5|3.4e-33|43.1|116/0|d.58.11.1|1/1|EF-G C-terminal domain-like|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rC1BDE6646B46A665454867G6A67C8Kc9B9A7C8BbF8B9B9EC*BBA7CQENQ6HFCDD988A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 645 STR:RPRED 99.2 SQ:SECSTR ###ccHHHHHHccHHHHHHHHHHHHHHHTTcccHHHHEEEEEEEEcTTcEEEEEEcccccHHTcHHHHccEEEEEEHHHHHHHTTccEEEEEHEEEHEEcTTccEEEEEEEEccccGGGHHHHHHHHHHccEEEEEEETTTcccTHHHHHHHHHHHTTcEEEEEEEcTTcTTccHHHHHHHHHHHTHHHcccHccccTTcEEEcTTTcccHHHHHHHHcccTTTTHHHHHHHHHHHcccccccTTcccEEEEEEEEEETTTEEEEEEEEEEccEEcccEEEETTTccEEEEccEEEEEcccEEEccEEcTTcEEEEEcccccGGGccTTcEEEEcccccccccccccccTTcccccccEEEEEEEcccGGGHHHHHHHHHHHHTTccccEEEETTTEEEEEEEEccHHHHHHHHHHHHHTcccEEEcccEEcEEEEEcEEEEEEEEEEEEEEGGGHHHHHHHHHHTTcEEEEEEccTTEEEEEEEEEHHHHHTTTHHHHHHHTTcccEEEEEEEEEEEccEEEEEEETTEEEEccEEEEEEEEGGGHHHHHHHHHHHHHHHccccccHHHHHTTcEEEEEEETTEEEEEccccTTcccccHHHHHHTTTccEEEEEEEEccHHHHHHTEEEEcccHHHHHHEEEEEEE## DISOP:02AL 1-34, 639-650| PSIPRED cccccccccccccccccEEEEEEEHHHHHHHcccccccEEEEEEEEEcccHHHHHHHHHHHHcccHHHHcHHHHHHccHHHHHHcccEEEEEEEEEEEEcccccccEEEEEEccccEEcHHHHHHHHHHHccEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccEEEEEEEEEcEEccccEEEEEEcccEEEEEEEEEEEEcccccEEEccccccccEEEEccccEEEEccEEEccccccccccccccccEEEEEEEEccHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccEEEEEEEHHHHHHHHHHHcccccEEEEccccEEEEEEEccccccEEEEEEEccHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEcccHHHccHHHHHHHHcccEEEEEEEEEccccccccccccccEEEEEEccccEEEcccccEEEccEEEEcccccEEEcEEEEEccccccEEEEEEcccccccccccccccEEEEcccccccHHHHHHHcccccEEEEcccEEEEEEEcccHHHHHHHHHHHccc //