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Thermobifida fusca YX (tfus0)
Gene : AAZ56508.1
DDBJ      :             similar to Cell division protein FtsI/penicillin-binding protein 2
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  197/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.17.4d.175.1e.3.1
:643 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->367 1vqqB PDBj 4e-08 21.1 %
:RPS:PDB   30->126 3b7cA PDBj 9e-05 14.7 %
:RPS:PDB   150->603 3dwkC PDBj 8e-28 9.7 %
:RPS:SCOP  33->136 1mwrA1  d.17.4.5 * 2e-17 10.8 %
:RPS:SCOP  142->328 1mwrA2  d.175.1.1 * 7e-18 13.1 %
:RPS:SCOP  329->604 1mwrA3  e.3.1.1 * 4e-23 18.8 %
:HMM:SCOP  33->139 1vqqA1 d.17.4.5 * 2.1e-08 20.0 %
:HMM:SCOP  140->328 1vqqA2 d.175.1.1 * 3.9e-27 28.0 %
:HMM:SCOP  329->625 1vqqA3 e.3.1.1 * 6.6e-42 29.3 %
:RPS:PFM   31->141 PF05223 * MecA_N 1e-11 30.9 %
:RPS:PFM   351->593 PF00905 * Transpeptidase 9e-06 28.5 %
:HMM:PFM   349->608 PF00905 * Transpeptidase 1e-31 29.6 257/304  
:HMM:PFM   149->312 PF03717 * PBP_dimer 2.3e-18 24.2 161/177  
:HMM:PFM   31->140 PF05223 * MecA_N 8.7e-15 29.4 109/118  
:BLT:SWISS 31->403 PBPC_BACSU 4e-18 25.5 %
:BLT:SWISS 332->504 PBPA_MYCTU 8e-04 30.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56508.1 GT:GENE AAZ56508.1 GT:PRODUCT similar to Cell division protein FtsI/penicillin-binding protein 2 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2912821..2914752) GB:FROM 2912821 GB:TO 2914752 GB:DIRECTION - GB:PRODUCT similar to Cell division protein FtsI/penicillin-binding protein 2 GB:PROTEIN_ID AAZ56508.1 GB:DB_XREF GI:71916606 LENGTH 643 SQ:AASEQ MPPRNSLRRFLAATTGALLVTATAACAAEPSPEVAVRSFLLNWQEGDYEAAAQVTNGDVAEVAEALRQAHNQLDLAALRLSLRPIEMDGDTATAGFGAEADLGIGDPVWRYTGTIPLTRTDSGWVIDWSPAVIHPELGEGERLAVTYDVPDRGQIYDRNGEPLVEETEVTAFGVRPAAMADMTEGINSLAELLDEDPEPLLNRVRSAPPEEFQPLVLKRTQDVSSSLLAKATAIPGVEVEEGTMPLLPIRAAGVVGEVAGTAEHKVANRVSGPYQAGDTVGLNGLQSSFQQQLAGTATTRVVTLSSSGEETGVLETWTGEESGSLTTTLDHAVQEAAETSLATINGTAYLVAVDARSGEILAAAGQPDEPSNDGALTRQYYPGETFTIVSAAALLSGGKATLDTTMACEQQAEVGSRTFTNPNGGSLLGTPDLRTNFAYSCTTAFVGLSSSLSAADLAESAERFGIGQPWQLPVPAFSGEFTVQGGQEQVAAATVGADGITVSPLGMALVAAAVAGGQWHAPRLIDGVEPEVDSIPVDPAVLEPLRELMRAPVEQGSASVLNIDYVNPVHGQTGMVTQEIDGEEKTIQWFVGYRGHVAFAVVVEAAPSHTYQFAVNSALSFLQLLPASYVSAAEADSQLEGSA GT:EXON 1|1-643:0| BL:SWS:NREP 2 BL:SWS:REP 31->403|PBPC_BACSU|4e-18|25.5|364/668| BL:SWS:REP 332->504|PBPA_MYCTU|8e-04|30.6|170/100| SEG 11->28|laattgallvtataacaa| SEG 191->201|elldedpepll| SEG 251->260|aagvvgevag| SEG 448->462|lssslsaadlaesae| SEG 505->517|lgmalvaaavagg| BL:PDB:NREP 1 BL:PDB:REP 56->367|1vqqB|4e-08|21.1|299/625| RP:PDB:NREP 2 RP:PDB:REP 30->126|3b7cA|9e-05|14.7|95/115| RP:PDB:REP 150->603|3dwkC|8e-28|9.7|435/623| RP:PFM:NREP 2 RP:PFM:REP 31->141|PF05223|1e-11|30.9|110/118|MecA_N| RP:PFM:REP 351->593|PF00905|9e-06|28.5|235/289|Transpeptidase| HM:PFM:NREP 3 HM:PFM:REP 349->608|PF00905|1e-31|29.6|257/304|Transpeptidase| HM:PFM:REP 149->312|PF03717|2.3e-18|24.2|161/177|PBP_dimer| HM:PFM:REP 31->140|PF05223|8.7e-15|29.4|109/118|MecA_N| GO:PFM:NREP 3 GO:PFM GO:0046677|"GO:response to antibiotic"|PF05223|IPR007887| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 3 RP:SCP:REP 33->136|1mwrA1|2e-17|10.8|102/106|d.17.4.5| RP:SCP:REP 142->328|1mwrA2|7e-18|13.1|183/188|d.175.1.1| RP:SCP:REP 329->604|1mwrA3|4e-23|18.8|266/330|e.3.1.1| HM:SCP:REP 33->139|1vqqA1|2.1e-08|20.0|105/0|d.17.4.5|1/1|NTF2-like| HM:SCP:REP 140->328|1vqqA2|3.9e-27|28.0|186/0|d.175.1.1|1/1|Penicillin binding protein dimerisation domain| HM:SCP:REP 329->625|1vqqA3|6.6e-42|29.3|290/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 240 OP:NHOMOORG 198 OP:PATTERN -------------------------------------------------------------------- 111-411211121211111-121112111111233322221122111--11-1111-111--1-1124632-111-----------------------------1---11--------------------1---11---------111111111111------1-1111-2-------------------1--1-----11-----11--111-1--11---1--111111---------------------------------------------------------------------------------------------1-1--------1-1--22---------1---1--11----11113-----1----------------------------------------------------------------1111111---111111111----1-----------------------------------1-----1111111---------------11-111--------1--1-----1-1-1--------------1-1-112-----1-111-11-11-111----3-1-------------------------------1------------------11--1111----1-2------------------------------------------------------------------------------------------------------1------------------------------------1111----1111----------------------------------------1------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 573 STR:RPRED 89.1 SQ:SECSTR #############################HHHHHHHHHHHHHHHTTcHHHHTTccccTTHHHHHHHHHHcccGGGccEEEEEEEEEEEETTEEEEEEEEEEccccccEEEEEEE##EEEETTEHHHHHHHHHHHHHHcEEETTEEEcccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHccccTTccHHHHHTTcccHHHHHHHHTccccTTccHHHHHHHHHGGGcHHHHcTTTcHHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccTTGGGcccccTTGGGHHHHHHHHHHHTTccTTccccHHHHTTcTcEEEEcccHHHHHHHHHHHHHcTEEEEEEEEETTTccEEEEEccTTccTTccTTTccEEcGGGGHHHTHHHHHHHccccTTcEEEccccccccccccccTTccccccEEEHHHHHHTTcHHHHHHHHHHHHHHccTTHHHHHHHHTTccccccccHHHHTTcTTcEHHHHHHHTTTcEEEccccEEEEEcccccEEEccccEEEEEccccEEEcccHHHHHHHHHHHHTTccTTcTTTTccccccccEEEEEccTTHHHHTTccEEEEEEEcccEEEEEEEE####################################### DISOP:02AL 1-4, 632-643| PSIPRED cccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHccccccEEEEEEEEEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEcccEEEEEEHHHHHHHHHcccEEEEEEEcccccEEEEccccEEEEEEEEEEEEEEHHHHccHHHHHHHHHHHHcccHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHcccccEEEEEccEEEcccccccEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHcccccccccEEEEEEcHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccccccEEEcccEEEcccEEcccccccccccEEEHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccEEcHHHHHHHHHHHHcccEEccEEEEEEccccccEEEcHHHHHHHHHHHHHHccccccEEEEcccccEEEEEEccccccccccccccEEEEEEcccEEEEEEEEEcccccccEEEEEHHHHHHHHHHHHHHHccccccccccc //