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Thermobifida fusca YX (tfus0)
Gene : AAZ56513.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.8
:279 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   16->172 2c0mA PDBj 1e-07 13.4 %
:RPS:SCOP  10->183 1w3bA  a.118.8.1 * 4e-10 16.1 %
:HMM:SCOP  10->196 2c2lA1 a.118.8.1 * 3.7e-10 23.7 %
:HMM:PFM   61->81 PF07721 * TPR_4 0.00014 42.9 21/26  
:HMM:PFM   157->179 PF07721 * TPR_4 0.00017 43.5 23/26  
:BLT:SWISS 9->148 VEXE_SALTI 6e-04 28.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56513.1 GT:GENE AAZ56513.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2918550..2919389) GB:FROM 2918550 GB:TO 2919389 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAZ56513.1 GB:DB_XREF GI:71916611 LENGTH 279 SQ:AASEQ MQPNTERPSVDALLEAVDHVWNDVDRLRDLVRSALHEGFGPEVLPAAQRVRELDPDLDRGMVLYALALRACGRHDEAERELIRHIKGRGGHADTWFALVPLAERRGSTRDVATALANALRCDPDHREALVWGWRYHARQHGAEQADAWLAEQAPRSWRATLMLGERALHRGELDSALELFTAACTRGARHGEPLRRAARALAAQGHDTECISLVLSHWKASHGPLPLVTAIEAQLRLGRISDAVLAVARLRGLGEAERDHPEVAEVCRKVEQLRVHHGL GT:EXON 1|1-279:0| BL:SWS:NREP 1 BL:SWS:REP 9->148|VEXE_SALTI|6e-04|28.5|137/100| SEG 194->203|lrraaralaa| RP:PDB:NREP 1 RP:PDB:REP 16->172|2c0mA|1e-07|13.4|157/297| HM:PFM:NREP 2 HM:PFM:REP 61->81|PF07721|0.00014|42.9|21/26|TPR_4| HM:PFM:REP 157->179|PF07721|0.00017|43.5|23/26|TPR_4| RP:SCP:NREP 1 RP:SCP:REP 10->183|1w3bA|4e-10|16.1|174/388|a.118.8.1| HM:SCP:REP 10->196|2c2lA1|3.7e-10|23.7|177/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- -1--------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 183 STR:RPRED 65.6 SQ:SECSTR #########HHTTccTTcTTcccHHHHHHHHHHHHHHTcHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcccTTTcccccHHHHHHHHHHHHHHGGGHHHHHHTcHHHHHHHTTcccHHHHHHTTccEHTccTTcHH####################################################################################### DISOP:02AL 1-6, 8-10| PSIPRED cccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcc //