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Thermobifida fusca YX (tfus0)
Gene : AAZ56517.1
DDBJ      :             HAD-superfamily hydrolase subfamily IA, variant 3
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  112/915 : Eukaryota  61/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->198 2b0cA PDBj 2e-15 33.7 %
:RPS:PDB   6->209 3d6jA PDBj 4e-15 15.5 %
:RPS:SCOP  6->214 1cqzB1  c.108.1.2 * 9e-42 28.1 %
:HMM:SCOP  1->206 1vj5A1 c.108.1.2 * 2.2e-32 26.7 %
:RPS:PFM   44->124 PF12281 * DUF3620 4e-04 35.9 %
:HMM:PFM   7->185 PF00702 * Hydrolase 8.3e-17 27.7 159/192  
:BLT:SWISS 9->198 YIHX_SHIFL 5e-15 33.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56517.1 GT:GENE AAZ56517.1 GT:PRODUCT HAD-superfamily hydrolase subfamily IA, variant 3 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2926158..2926814) GB:FROM 2926158 GB:TO 2926814 GB:DIRECTION - GB:PRODUCT HAD-superfamily hydrolase subfamily IA, variant 3 GB:PROTEIN_ID AAZ56517.1 GB:DB_XREF GI:71916615 InterPro:IPR005833 InterPro:IPR006402 LENGTH 218 SQ:AASEQ MSRNRRGIIIDWGGVLTSPLPETIAAWLEQERIDRAAYREVMRTWVHAAYHEGARSPVHALERGEVDPAEFERMLAARLRLVDGGPVPAEGLIARMFAGFEPVEEMYAALRAARSQGIRTCLLSNSWGNVYPRERFAETFDGVVISGEVGMRKPEPEIFHYALELVGLEAEECVFVDDVERNVAAAVDLGMTGIVHRDPAETRAQLEEACGISLASLL GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 9->198|YIHX_SHIFL|5e-15|33.7|175/199| BL:PDB:NREP 1 BL:PDB:REP 9->198|2b0cA|2e-15|33.7|175/199| RP:PDB:NREP 1 RP:PDB:REP 6->209|3d6jA|4e-15|15.5|181/206| RP:PFM:NREP 1 RP:PFM:REP 44->124|PF12281|4e-04|35.9|78/211|DUF3620| HM:PFM:NREP 1 HM:PFM:REP 7->185|PF00702|8.3e-17|27.7|159/192|Hydrolase| RP:SCP:NREP 1 RP:SCP:REP 6->214|1cqzB1|9e-42|28.1|203/222|c.108.1.2| HM:SCP:REP 1->206|1vj5A1|2.2e-32|26.7|195/226|c.108.1.2|1/1|HAD-like| OP:NHOMO 250 OP:NHOMOORG 173 OP:PATTERN -------------------------------------------------------------------- 2---41--11--1------------------------111--11-1-----1------------3111--1-----11----------------------------------------------------------------------------------------------------------21-------------------------------------------------------------------------------------------------------------------------------1------------11-----------------------1-1-----------------------112-------111---2-111----------------------1----------1-----1---1-------------------------------------------------------11------------1----------------1---------1-----------------1-----------------------1-------------------------------------------------11-----------------------------------------11----11111111111-11111111111111111111111-111-----------------1111111--111111111111--------------------------------------------------1--------------------------------1----------------------------------------------------------------1------1--- -----------------------1111---------------------------------------------------------------2---1-------11-1-12-3----131221111422326J2-229-2212-123-222-211312112132111------1121------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 100.0 SQ:SECSTR EcccccEEEEcccTTTEEcHHHHHHHHHHHHHcccHHHHTTTTccHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEEEEHHGGGcEEcTTHHHHHHHHHHHTcEEEEEccccHHHHHHHHcTTcccEEEcGGGccccTTcTHHHHHHHHHTTccGGGEEEEEcHHHHHHHHHTcEEEEETEccTcccTTGGGGcHHTTcGGHH DISOP:02AL 1-2| PSIPRED ccccccEEEEEccccEEccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccHHHccEEEEEHHcccccccHHHHHHHHHHHcccHHHEEEEcccHHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccccc //