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Thermobifida fusca YX (tfus0)
Gene : AAZ56552.1
DDBJ      :             FO synthase subunit 1 / FO synthase subunit 2
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  170/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:871 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   66->306 3iizA PDBj 1e-06 23.7 %
:RPS:PDB   15->345 3cixA PDBj 3e-15 17.8 %
:RPS:PDB   537->843 3cixA PDBj 7e-16 13.7 %
:RPS:SCOP  25->334 1r30A  c.1.28.1 * 4e-38 23.3 %
:RPS:SCOP  528->717 1r30A  c.1.28.1 * 1e-08 16.2 %
:HMM:SCOP  18->373 1r30A_ c.1.28.1 * 1.2e-41 29.2 %
:HMM:SCOP  491->838 1r30A_ c.1.28.1 * 8.4e-55 27.9 %
:HMM:PFM   69->247 PF04055 * Radical_SAM 2.1e-13 16.5 158/166  
:HMM:PFM   537->700 PF04055 * Radical_SAM 6.4e-18 17.8 152/166  
:BLT:SWISS 16->858 FBIC_STRAW 0.0 63.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56552.1 GT:GENE AAZ56552.1 GT:PRODUCT FO synthase subunit 1 / FO synthase subunit 2 GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(2968867..2971482) GB:FROM 2968867 GB:TO 2971482 GB:DIRECTION - GB:PRODUCT FO synthase subunit 1 / FO synthase subunit 2 GB:PROTEIN_ID AAZ56552.1 GB:DB_XREF GI:71916650 InterPro:IPR005244 InterPro:IPR006638 LENGTH 871 SQ:AASEQ MVPSAAALRRALARVRDGKTLDPTEAEILLHARGDDLEALLDHASRIRDAGLAAAGRPGVITYSRKVFIPLTRLCRDRCHYCTFATAPAKLSAPYLSPDEVLEIARQGAALGCKEALFTLGDRPEDRWPQARAWLDEQGYDDTLSYVRAMAIRVLEETGLLPHLNPGVLTWSDFQRLKPVAPSMGMMLETTARRLFTERGQVHYGSPDKDPVVRLRVLEDAGRSTVPFTTGILIGIGETLAERVDSIFAIRKIARQYGAIQEVIVQNFRAKPDTALRDWPDADLEDLAATIAVTRILLGPKAHIQAPPNLITDDGNPEQGTGDEFTLMLRAGIDDWGGVSPLTPDHVNPERPWPQIDLLAERTAAAGFTLRERLTVYPEYVRQGEPWIDPRLHDHVAVLADPETGLARPDAVITGRPWQEPASLESGGRTNLHKDIDTAGRSSDRRGDFDSVYGDWSELRARIAQPARDTRAPHRFDPEIRAALRRAEDDPAGITDRDALALLAADGPELEALADLADRVRRDTVGDEITFVVTRNINFTNVCYTGCRFCAFAQRRTDADAYTLSLEQVADRAAEAWEAGATEVCMQGGIHPDLPGTAYFDIARAVRERTPDMHIHAFSPMEVMNGVSRTNLPIREWLLRAREAGLDSLPGTAAEILDDDVRWVLTKGKLPTAQWIEVITAAHDLGIPTTATMMYGHVDAPHHWVAHIRLIRSLQERSLEQNGRPGFTEFVLLPFVHTNAPIYLAGLSRTGPTEQENRAVHALARLLLHGAIDNIQCSWVKLSEEQCRRLLAGGVNDIGGTLMEETISRMAGSTNGSFKTISEMRAMVEPLGRPLRQRDTLYREVPAERRAIAEANDGVAASLRRTRLPVV GT:EXON 1|1-871:0| BL:SWS:NREP 1 BL:SWS:REP 16->858|FBIC_STRAW|0.0|63.3|823/861| SEG 5->14|aaalrralar| SEG 496->523|drdalallaadgpelealadladrvrrd| SEG 570->583|adraaeaweagate| SEG 758->771|ravhalarlllhga| BL:PDB:NREP 1 BL:PDB:REP 66->306|3iizA|1e-06|23.7|211/344| RP:PDB:NREP 2 RP:PDB:REP 15->345|3cixA|3e-15|17.8|288/345| RP:PDB:REP 537->843|3cixA|7e-16|13.7|278/345| HM:PFM:NREP 2 HM:PFM:REP 69->247|PF04055|2.1e-13|16.5|158/166|Radical_SAM| HM:PFM:REP 537->700|PF04055|6.4e-18|17.8|152/166|Radical_SAM| RP:SCP:NREP 2 RP:SCP:REP 25->334|1r30A|4e-38|23.3|270/314|c.1.28.1| RP:SCP:REP 528->717|1r30A|1e-08|16.2|171/314|c.1.28.1| HM:SCP:REP 18->373|1r30A_|1.2e-41|29.2|308/312|c.1.28.1|1/2|Radical SAM enzymes| HM:SCP:REP 491->838|1r30A_|8.4e-55|27.9|305/312|c.1.28.1|2/2|Radical SAM enzymes| OP:NHOMO 439 OP:NHOMOORG 226 OP:PATTERN 22-2-------------2222224222222222222223332333233233332--------22--44 21213---------11111-1111111111111111112233332---------------333-1-13331-----------122222-----------------2---222222222222222--------------------22-222222--22------22222222------------22222---------------------22--------------------22----------------------------------------------------------------------------------------------------------------------2--22--2222--22-------222---1------------1---1--------------------------------------------2-------------------------------------------------------1--------------------2-------------------------------------------------1----12-222222222-2222222222222---22222222222222222222222222--------2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111----------------------------------------------2-- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------211181-1111-----1------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 688 STR:RPRED 79.0 SQ:SECSTR ##############HHcccccEEEEEEEEEEEEEEEEEEEEcccEEETTEEEccEEEEEcTTcccEEEEEEEcccccccTTcccGGGccTTccEEEcHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGHHHHHHHHHHHHTTTccEEETTTccEEEEEHHHHEEccccccccHHHHHHHTccEEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHHTccEEEEEEEEcTTTTccHHHHHHHHHHHHHHHHHHccEEEEEEEEcccccHHHHHHTTcccTTTTcccccHHHHHcTTccccccTTccccccHHHHHHcTTHHHHHHTTTccEEccccccTTTcTTTTccTTcHHHHHHHHHHTTcEEcccccccccccc#############################################################################################################################################ETTTccEEEEEccEEEEcccccccTTcTTcTTccccccccccHHHHHHHHHHHHHTTccEEEEEEcccGGGTTHHHHHHHHHHHTTccEEEEEEcccTTTccGEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHHccTTccHHHHHHHHHHHHTTcEEEEccEEccTTccHHHHHHHHHHHHHHTccEEHTTTcHccEEccccTTcTTTTccc##EcTTHHccHHHHHHHHHHHHHHcTTccccccHHHHHHcTTHHHHHHTTTccEEccccccTTccccTTTTccTTcHHHHHHHHHHHTTcEEcccccccccc########################## DISOP:02AL 856-857| PSIPRED ccccHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHccccHHHccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccEEccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccEEEccEEEEcccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHcccc //