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Thermobifida fusca YX (tfus0)
Gene : AAZ56615.1
DDBJ      :             regulatory protein, LuxR:Response regulator receiver
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  704/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:233 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->232 1a04A PDBj 9e-22 29.8 %
:RPS:PDB   26->233 3c3wA PDBj 1e-26 34.1 %
:RPS:SCOP  26->139 1a0oA  c.23.1.1 * 2e-15 21.9 %
:RPS:SCOP  167->232 1a04A1  a.4.6.2 * 2e-19 37.9 %
:HMM:SCOP  19->148 1k66A_ c.23.1.1 * 1.8e-27 34.6 %
:HMM:SCOP  151->233 1p4wA_ a.4.6.2 * 1e-21 43.4 %
:RPS:PFM   27->136 PF00072 * Response_reg 2e-13 36.4 %
:RPS:PFM   173->227 PF00196 * GerE 9e-12 61.8 %
:HMM:PFM   27->136 PF00072 * Response_reg 6.5e-23 33.6 110/112  
:HMM:PFM   171->227 PF00196 * GerE 2.9e-22 54.4 57/58  
:BLT:SWISS 27->220 DEGU_BACSU 1e-28 35.1 %
:PROS 187->214|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56615.1 GT:GENE AAZ56615.1 GT:PRODUCT regulatory protein, LuxR:Response regulator receiver GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3048328..3049029) GB:FROM 3048328 GB:TO 3049029 GB:DIRECTION - GB:PRODUCT regulatory protein, LuxR:Response regulator receiver GB:PROTEIN_ID AAZ56615.1 GB:DB_XREF GI:71916713 InterPro:IPR000792 InterPro:IPR001789 LENGTH 233 SQ:AASEQ MRGWYSQVESHDVGEENTFASGRIPRIVIVDDHHLFRSGVRGELGDTVDVVGEAGDVDEAVRVISEQRPDLVLLDVHLPGGGGIEVLRRILPKHPEIRFLALSVSDAAEDVIGVIRAGARGYVTKTISGTELADAIVRVADGDAVFSPRLAGFVLDAFAATDAPPVDPELDRLTQREREVLRLIARGYAYKEVARELFISVKTVETHVSSVLRKLQLSNRHELSRWATARKLV GT:EXON 1|1-233:0| BL:SWS:NREP 1 BL:SWS:REP 27->220|DEGU_BACSU|1e-28|35.1|194/229| PROS 187->214|PS00622|HTH_LUXR_1|PDOC00542| SEG 48->61|vdvvgeagdvdeav| BL:PDB:NREP 1 BL:PDB:REP 27->232|1a04A|9e-22|29.8|198/205| RP:PDB:NREP 1 RP:PDB:REP 26->233|3c3wA|1e-26|34.1|205/211| RP:PFM:NREP 2 RP:PFM:REP 27->136|PF00072|2e-13|36.4|110/111|Response_reg| RP:PFM:REP 173->227|PF00196|9e-12|61.8|55/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 27->136|PF00072|6.5e-23|33.6|110/112|Response_reg| HM:PFM:REP 171->227|PF00196|2.9e-22|54.4|57/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 26->139|1a0oA|2e-15|21.9|114/128|c.23.1.1| RP:SCP:REP 167->232|1a04A1|2e-19|37.9|66/67|a.4.6.2| HM:SCP:REP 19->148|1k66A_|1.8e-27|34.6|130/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 151->233|1p4wA_|1e-21|43.4|83/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 3730 OP:NHOMOORG 710 OP:PATTERN -------------------------------1------------------------------------ C9E3i65644432264422-25--4D222223B898DJJI5D8TFM965A96677565--89H6XDPYhX93333B34-33-9-----11----11---6-7133L5J33----------------------1-1-AAACC767E6C6786643211---322553DECD2111-11131-1177632--256955555586475577797AA596872435522222222DA344434434444444344431---22-1--1221122221-1-11112223233332222222222211111111111113222222222161721111221-1-11--1---5-12-C111-86213125-21111---7112221-----16I6B3144455722222222222-98889CA8477-53336363547832-32413232333422222222-1111743------------------------------1331-65444956B777888588BI999A4A9DCEIKK12FG9BD977999BD35747838431111111-1486923611172143223-32643562434445342------------------------1--751643766426888A4869A977768788---3322------74455746885754577-8777656666857556555555666438678888788777788766655653-766666566666--334444411111363311111211111-112222222221253EEDEBG9CACBEA6888---------123354555538467C998A875562222112-442222--------2-------------------------------------3K- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------2--2---1-1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 233 STR:RPRED 100.0 SQ:SECSTR cccccHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHTTEEEEEEEccHHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHccHHHHccTTTTccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTTT DISOP:02AL 1-3, 5-23, 155-172| PSIPRED ccccHHHccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccc //