[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ56708.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  267/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.36.1
:352 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   97->220 1kekA PDBj 2e-10 29.0 %
:RPS:PDB   35->220 3ea4A PDBj 1e-22 14.1 %
:RPS:SCOP  35->221 1upaA3  c.36.1.9 * 4e-23 20.3 %
:HMM:SCOP  33->352 1b0pA2 c.36.1.12 * 1.3e-86 34.8 %
:RPS:PFM   70->202 PF02775 * TPP_enzyme_C 4e-06 37.3 %
:HMM:PFM   69->216 PF02775 * TPP_enzyme_C 5.2e-34 32.6 141/150  
:BLT:SWISS 36->263 KORB_ARCFU 3e-44 41.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56708.1 GT:GENE AAZ56708.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3149003..3150061 GB:FROM 3149003 GB:TO 3150061 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID AAZ56708.1 GB:DB_XREF GI:71916806 LENGTH 352 SQ:AASEQ MPSEKNGAVFRGLKLVPRSDTTYKMKDFKSDQEVRWCPGCGDYAILSAFQGFLPELGVPRENIVVISGIGCSSRFPYYLSTYGMHSIHGRAPAIATGLAASRSDLSVWVVTGDGDALSIGGNHLIHAMRRNVNLNILMFNNRIYGLTKGQYSPTSEAGKITKSSPMGSLDNPFNPVALALGAGATFVARTVDSDRKHLTEVLRAAADHQGTSFVEIYQNCPIFNDDAFALVKEPGERDNRVLRLEHGQPLKIGEDRGVVFGEYGRLTVVDLADVSEDQLVVHDAHRADPSYAFALAQLDEPAFEHVPIGVFRDVEAPTYEEAMAEQIEQARATQGEGDLMELLAGSDTWTIK GT:EXON 1|1-352:0| BL:SWS:NREP 1 BL:SWS:REP 36->263|KORB_ARCFU|3e-44|41.6|226/267| BL:PDB:NREP 1 BL:PDB:REP 97->220|1kekA|2e-10|29.0|124/1231| RP:PDB:NREP 1 RP:PDB:REP 35->220|3ea4A|1e-22|14.1|184/581| RP:PFM:NREP 1 RP:PFM:REP 70->202|PF02775|4e-06|37.3|126/139|TPP_enzyme_C| HM:PFM:NREP 1 HM:PFM:REP 69->216|PF02775|5.2e-34|32.6|141/150|TPP_enzyme_C| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02775|IPR011766| GO:PFM GO:0030976|"GO:thiamin pyrophosphate binding"|PF02775|IPR011766| RP:SCP:NREP 1 RP:SCP:REP 35->221|1upaA3|4e-23|20.3|177/198|c.36.1.9| HM:SCP:REP 33->352|1b0pA2|1.3e-86|34.8|316/0|c.36.1.12|1/1|Thiamin diphosphate-binding fold (THDP-binding)| OP:NHOMO 549 OP:NHOMOORG 336 OP:PATTERN 22111112111111122233211222222323314112333332212212222123223332221-11 134-1---------11111-11--2111111122221-121322----------------11121111211--------111-2412122232222-1-------1--1----------------1112121211222222---1-----------------------------------------11121-1-111111111111111-1----1111111-1-------1111111111111111111111----------------------------------------------------------------------15312-1--111-1-23------2-1--2--32---2422442223131-121---1-------111---11212----------------------------------------1-----------------------1-1------------------------------1111-----------------------------------------------11---1----------------3---452333313233312334222223343--241111211111111111111111111----1-------------------------11----2----------------------------------------------------------------------------------------------------11111---------------------------------------------------------1---111111---------------------21--------------1---------------------------333323323311- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 94.6 SQ:SECSTR ####HTTccccccccTHHHHHHHHHHHHHHcTTcccTTcccHHHHHHHHHHHHTTccEEEEccHHHHHHHcccccTTcEEcccccccTTcHHHHHHHHHHHcTTccEEEEEEHHHHHTHTTTHHHHHHHTTccEEEEEEEccccHHHHHHHHHHcTTcccccccccGGGTTcccccHHHHHHHTTccEEEEcEcGGGHHHHHHHHHHccccEEEEEEccTEcccccccccccccGGGGGcHHHHHHHHHHHTTHHTTccHHHHTcccHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccGGGHHHTTcccccHHHHHHHHHHHHHHHGGG############### DISOP:02AL 1-4, 347-348, 350-352| PSIPRED ccccccHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEccccHHHHccccEEcccHHHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHccHHHHHHHHHccccEEEEEEEccEEEccccccccccccccEEEccccccccccccHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHccHHHHHcccEEEEcccccccccccccccccccccEEcccccccccccEEccccHHHHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHHHHHccccHHHHHHHHccccEEEEc //