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Thermobifida fusca YX (tfus0)
Gene : AAZ56770.1
DDBJ      :             transcriptional regulatory protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  725/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.2.1
:253 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   130->222 2zxjA PDBj 1e-17 46.2 %
:RPS:PDB   129->225 2d1vA PDBj 4e-22 45.4 %
:RPS:SCOP  109->156 1do8A1  c.2.1.7 * 2e-05 10.4 %
:RPS:SCOP  129->224 1gxpA  a.4.6.1 * 3e-22 34.4 %
:HMM:SCOP  123->227 1ys7A1 a.4.6.1 * 6.9e-30 45.7 %
:RPS:PFM   169->223 PF00486 * Trans_reg_C 1e-10 54.5 %
:HMM:PFM   153->224 PF00486 * Trans_reg_C 3.6e-29 51.4 72/77  
:BLT:SWISS 1->225 GLNR_STRCO 3e-82 71.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56770.1 GT:GENE AAZ56770.1 GT:PRODUCT transcriptional regulatory protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3215948..3216709 GB:FROM 3215948 GB:TO 3216709 GB:DIRECTION + GB:PRODUCT transcriptional regulatory protein GB:PROTEIN_ID AAZ56770.1 GB:DB_XREF GI:71916868 InterPro:IPR001867 LENGTH 253 SQ:AASEQ MSHLLLLTNSNDPSDQILPALGLLLHSVRVAPAEASALLTPGPDNAAGSPVDAILVDARTNLVAARNLCRLLNTTGLDCPLIAVLTEGGAAALTPEWQVTDFLLTTAGPAEVEARLRLAIGRADSADDPDEIRRGDLVIDEATYSARLRGRILDLTFKEFELLKFLAQHPGRVFTRAQLLQEVWGYDYFGGTRTIDVHVRRLRAKLGPEYESLIGTVRNVGYRFVMDPAAKSNSDAAMPRMAEPERSLAPHQL GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 1->225|GLNR_STRCO|3e-82|71.4|217/267| SEG 157->166|fkefellkfl| BL:PDB:NREP 1 BL:PDB:REP 130->222|2zxjA|1e-17|46.2|93/100| RP:PDB:NREP 1 RP:PDB:REP 129->225|2d1vA|4e-22|45.4|97/103| RP:PFM:NREP 1 RP:PFM:REP 169->223|PF00486|1e-10|54.5|55/77|Trans_reg_C| HM:PFM:NREP 1 HM:PFM:REP 153->224|PF00486|3.6e-29|51.4|72/77|Trans_reg_C| GO:PFM:NREP 4 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 109->156|1do8A1|2e-05|10.4|48/294|c.2.1.7| RP:SCP:REP 129->224|1gxpA|3e-22|34.4|96/103|a.4.6.1| HM:SCP:REP 123->227|1ys7A1|6.9e-30|45.7|105/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 3112 OP:NHOMOORG 727 OP:PATTERN -------------------------------------------------------------------- 33A3C33455635378877-76337977777798885C86788C8757577567743611DCB4A4CHCG833333442376511132-----1-----1-11-131352---------------21-11111-21CCCDD334B3A67888555774334447537BAA43323222223115513311-858IIJIJFGIAIGJHGF877677IIH457D498555555MO444444434444444555445453444433455444424434233322213222--33333333333-------------11122211114F97DAAAABBA897947758969571273652NJA662343365741-452243322----332222232222233233333222-22522222232-2334322455232522212221221113333333341223323-----------------------------112411222146664654333344663233252561336-167353221654232455121132-------22122324211221152111-74622554333223715-1-----------------------11221354232312122113122223212322--11122------44344415446565645-466455545545555555465622222322333332332423333425555--233333333333---211111111112534--------------133333222211233436666367795478---------22223444442222334212111111111--21222222------------------------------------3433221223232 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------4---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 220 STR:RPRED 87.0 SQ:SECSTR #######################cEEEEcccHHHHHHHHHHHGGGccEEEEEHHHHHHHHcTTHHHHHHHHHccEEEEEEEEcccHHHHHHHHHHHTTccEEEEEcTTcHHHHHHHHTTcEEEEEccccccEEETTEEEETTTTEEEETTEEccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHcTTccccEEEETTTEEEEcEcccTTTTHHHHHHHHHH########## DISOP:02AL 122-131, 226-253| PSIPRED ccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccccEEEEEcccccEEEEEcccccccccccccHHHHHHHHHHHHHcccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHccccccEEEEEEccEEEEEcccccccccccccccccccccccccccc //