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Thermobifida fusca YX (tfus0)
Gene : AAZ56797.1
DDBJ      :             anti-sigma factor antagonist
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  66/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:122 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->118 1thnB PDBj 3e-10 31.2 %
:RPS:PDB   4->115 1auzA PDBj 1e-16 25.0 %
:RPS:SCOP  1->109 1vc1A  c.13.2.1 * 5e-20 23.9 %
:HMM:SCOP  4->113 1h4xA_ c.13.2.1 * 9.7e-29 30.0 %
:RPS:PFM   15->107 PF01740 * STAS 4e-06 33.3 %
:HMM:PFM   11->109 PF01740 * STAS 6.2e-21 29.3 99/117  
:BLT:SWISS 4->112 RSBV_STRCO 4e-15 35.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56797.1 GT:GENE AAZ56797.1 GT:PRODUCT anti-sigma factor antagonist GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3243984..3244352 GB:FROM 3243984 GB:TO 3244352 GB:DIRECTION + GB:PRODUCT anti-sigma factor antagonist GB:PROTEIN_ID AAZ56797.1 GB:DB_XREF GI:71916895 InterPro:IPR002645 InterPro:IPR003658 LENGTH 122 SQ:AASEQ MYRLGVSTRVENRSVIVSVEGDLDIATAGDLRSAVQSAVDAHGPWLILDFSALDFMDSSGLNAIIHAYHLVRERGGSLALAAPNERVTKVIRLVGLHRQLPVHRTVAEAVAAMRALVVKQAG GT:EXON 1|1-122:0| BL:SWS:NREP 1 BL:SWS:REP 4->112|RSBV_STRCO|4e-15|35.8|109/113| BL:PDB:NREP 1 BL:PDB:REP 4->118|1thnB|3e-10|31.2|112/114| RP:PDB:NREP 1 RP:PDB:REP 4->115|1auzA|1e-16|25.0|112/116| RP:PFM:NREP 1 RP:PFM:REP 15->107|PF01740|4e-06|33.3|93/107|STAS| HM:PFM:NREP 1 HM:PFM:REP 11->109|PF01740|6.2e-21|29.3|99/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 1->109|1vc1A|5e-20|23.9|109/110|c.13.2.1| HM:SCP:REP 4->113|1h4xA_|9.7e-29|30.0|110/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 82 OP:NHOMOORG 67 OP:PATTERN -----------------------------------------------1-------------------- ----4----------------------------122----111111---21-------------1--4333-------1------------------------------------------------------------11--------1---1----------1--------------------------1--111111111111111------111------------------------------------------------------------------------------------------------------------111111111-1---11------1-----1----------1111---------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 95.9 SQ:SECSTR #cTccccEEEETTEEEEcccccccTTHHHHHHHHHHHHHcccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccGGGTcccccGGGTGGGTccTTc#### DISOP:02AL 1-4, 118-122| PSIPRED ccccEEEEEEEccEEEEEEEccEEHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEccccHHHHHHHHHHccccccc //