[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermobifida fusca YX (tfus0)
Gene : AAZ56820.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  314/915 : Eukaryota  155/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.58.19
:433 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   44->160 1q7lC PDBj 2e-11 30.8 %
:RPS:PDB   7->429 3dljB PDBj 8e-37 16.5 %
:RPS:SCOP  7->313 1q7l.1  c.56.5.4 * 4e-30 21.4 %
:RPS:SCOP  286->345 1xmbA2  d.58.19.1 * 6e-06 13.3 %
:HMM:SCOP  4->435 1q7l.1 c.56.5.4 * 2.9e-53 34.6 %
:RPS:PFM   76->159 PF01546 * Peptidase_M20 2e-08 38.6 %
:HMM:PFM   76->429 PF01546 * Peptidase_M20 2e-30 34.4 163/171  
:BLT:SWISS 7->424 P20D1_XENTR 5e-29 27.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56820.1 GT:GENE AAZ56820.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3271361..3272662) GB:FROM 3271361 GB:TO 3272662 GB:DIRECTION - GB:PRODUCT putative peptidase GB:PROTEIN_ID AAZ56820.1 GB:DB_XREF GI:71916918 InterPro:IPR001261 LENGTH 433 SQ:AASEQ MSTAETEVVDLCRELIAIDTSNYGDHSGPGEREAAEYVAAKLDEVGLEATIYESHPKRSSVVARIEGTDPSRPPLLVQGHLDVVPADPADWTHHPFSGEVADGCVWGRGAIDMKDMDAMVLAVVRQRMREGRRPPRDIVLAFLADEEAGGTHGAHWLVEKHPDLFADCTEAISEVGGFSITVNENRRLYLIETAEKGLAWMRLTARGTAGHGSMVNNDNAITELAAAVARLGQHKFPVRLTPAVRTFLEEVCAEFGIEFREDDVEATVAQLGPAASMVGATLRNSVNPTVLAGGYKANVIPGTATAQVDGRFLPGLEKEFFAEIDRLLGPKVTREFIQYLPAVQTEFTGGIVTAMTQALQAEDAGAKAVPYCMSGGTDAKAFMRLGIRNFGFVPLRLPPGLDFAGMFHGVDERVPVDALQFGVRVLDRFFDLA GT:EXON 1|1-433:0| BL:SWS:NREP 1 BL:SWS:REP 7->424|P20D1_XENTR|5e-29|27.6|410/512| SEG 125->136|rqrmregrrppr| BL:PDB:NREP 1 BL:PDB:REP 44->160|1q7lC|2e-11|30.8|117/190| RP:PDB:NREP 1 RP:PDB:REP 7->429|3dljB|8e-37|16.5|412/467| RP:PFM:NREP 1 RP:PFM:REP 76->159|PF01546|2e-08|38.6|83/308|Peptidase_M20| HM:PFM:NREP 1 HM:PFM:REP 76->429|PF01546|2e-30|34.4|163/171|Peptidase_M20| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 2 RP:SCP:REP 7->313|1q7l.1|4e-30|21.4|257/280|c.56.5.4| RP:SCP:REP 286->345|1xmbA2|6e-06|13.3|60/102|d.58.19.1| HM:SCP:REP 4->435|1q7l.1|2.9e-53|34.6|269/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 801 OP:NHOMOORG 504 OP:PATTERN --1--2-1-------2-2111111------2----11-11111111111-----1-211111111--- -17-211-111---21111-1111111111111111222112111111111-111112--11213213341-------11--2--------1--11--------1--22---------------------------11123---13-------------------------------------11-----2--21111111111111112-1112111--13-1--11--14--11111-1111111121111--3----------22--111--1----------1-------------------------------------1--------------1------2----1----11-----1------1--5--2222------1112---2212111111111112-11-22124-32-22211222212---1211-222221-1---------211111-------------------------111-1--221-12212122121111111111111111112--12--332--1--111-31------11---------------21--112111111--------------1-11-------------------------11------1-1--------------2---------1-1---------1----------------------------------111---1------------------------------------------------1222--111----1--11-1----------------------11------1-1--------------------1---------------------111111--------2-----------------------------1111-11112- ----332-21--113212121-1111311----2221111111------3233312111111211243211131-1-11121111-11-4A4134244532-1----1-3914224312-122232212AA2-331-11-4-25-12-212--3212233242232471211513222-----112--31311122221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 431 STR:RPRED 99.5 SQ:SECSTR cHHHHHHHHHHHHHHHTcccccccccHHHHHHHHHHHHHHHHHHTTcEEEEEcccEEcccEEEEEEcccTTccEEEEEEEcccccccGGGccccTTccEEETTEEEcTTTTTTHHHHHHHHHHHHHHHHTTcccccEEEEEEEccGGGTcTTHHHHHHHTTTTTTTTccEEEEcccccEccEcccccEEEEEEcEEEEEEEEEEcccccEETTTTTTccHHHHHHHHHTTcccTTcccccTTTTTTcccccHHHHHHHHTccccccccHHHHHHHHHTccEEEEEEEEccccccccccEEccEEEEEEEEEEcTTccHHHHHHHTTTcccEEEEEEEEEEccEEcccccGGGHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccEEEcccccTTcccTTccTTcTTcEEEHHHHHHHHHHHHHHTT## DISOP:02AL 1-4| PSIPRED cccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEccccEEEEEEEccccccccEEEEEccccEEccccccccccccccEEcccEEEEccccccccHHHHHHHHHHHHHHccccccccEEEEEEEcHHccHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEEccEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHcEEEcEEcccEEEccccccEEccEEEEEEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccEEEEEcccccccccccccccccccEEEHHHHHHHHHHHHHHHHHc //