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Thermobifida fusca YX (tfus0)
Gene : AAZ56842.1
DDBJ      :             regulatory protein, LuxR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.6d.110.2
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   224->277 1p4wA PDBj 2e-06 44.4 %
:RPS:PDB   214->283 3cloA PDBj 1e-21 25.7 %
:RPS:SCOP  224->286 1fseA  a.4.6.2 * 5e-17 36.5 %
:HMM:SCOP  11->161 1mc0A2 d.110.2.1 * 2.9e-08 28.2 %
:HMM:SCOP  203->286 1p4wA_ a.4.6.2 * 2.2e-19 41.7 %
:RPS:PFM   225->279 PF00196 * GerE 9e-11 49.1 %
:HMM:PFM   224->279 PF00196 * GerE 1.1e-21 46.4 56/58  
:HMM:PFM   15->144 PF01590 * GAF 0.00025 26.2 130/154  
:BLT:SWISS 223->283 PHZR_PSEFL 5e-08 42.6 %
:PROS 239->266|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56842.1 GT:GENE AAZ56842.1 GT:PRODUCT regulatory protein, LuxR GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3298297..3299157 GB:FROM 3298297 GB:TO 3299157 GB:DIRECTION + GB:PRODUCT regulatory protein, LuxR GB:PROTEIN_ID AAZ56842.1 GB:DB_XREF GI:71916940 InterPro:IPR000792 LENGTH 286 SQ:AASEQ MTIPPGPYSPNPAPLLARALRALRRDTGLPVAFGGPVSRDGRGFVIEQLDRARTTSLLRLRVQAGAGLGGRALALARPWVVDDYFAAEEITHVYDHAVAPEHLRSIAAAPVVVDGAPRAVLYGASRSSVDFGDRLLESVARVVQLVERDLAVEEEVRRRLAAAPPALHSAEVHELVAELSQIAATVQDEGIRRRLVDVCRRTRLLAGRVPSADRSPAPAVAAVRLSPREREVLAEVARGCTNDEVAEALGLLPNTVKSYLKSAMRKLGATNRVQAVNLARAAGALD GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 223->283|PHZR_PSEFL|5e-08|42.6|61/244| PROS 239->266|PS00622|HTH_LUXR_1|PDOC00542| SEG 12->25|papllaralralrr| SEG 57->77|llrlrvqagaglggralalar| SEG 145->172|lverdlaveeevrrrlaaappalhsaev| SEG 192->205|rrrlvdvcrrtrll| BL:PDB:NREP 1 BL:PDB:REP 224->277|1p4wA|2e-06|44.4|54/87| RP:PDB:NREP 1 RP:PDB:REP 214->283|3cloA|1e-21|25.7|70/249| RP:PFM:NREP 1 RP:PFM:REP 225->279|PF00196|9e-11|49.1|55/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 224->279|PF00196|1.1e-21|46.4|56/58|GerE| HM:PFM:REP 15->144|PF01590|0.00025|26.2|130/154|GAF| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 1 RP:SCP:REP 224->286|1fseA|5e-17|36.5|63/67|a.4.6.2| HM:SCP:REP 11->161|1mc0A2|2.9e-08|28.2|149/0|d.110.2.1|1/1|GAF domain-like| HM:SCP:REP 203->286|1p4wA_|2.2e-19|41.7|84/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 58 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- ----2111111111-------1---1------11112221-231-2-------------------112221-----------1--------------------------------------------------------------1-------------------------------------11111-------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------11--------1------------------------------------------------------1111----------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 80 STR:RPRED 28.0 SQ:SECSTR #############################################################################################################################################################################################################HcccccccEcccHHHHTTcccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccHHHHHHHHHHTccc# DISOP:02AL 1-3, 208-217| PSIPRED ccccccccccccHHHHHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccc //