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Thermobifida fusca YX (tfus0)
Gene : AAZ56843.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  73/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.92.2
:250 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   16->186 2qi9F PDBj 8e-08 30.5 %
:RPS:PDB   4->249 3be6A PDBj 2e-17 17.2 %
:RPS:SCOP  16->186 1n2zA  c.92.2.2 * 2e-25 24.7 %
:HMM:SCOP  15->249 1n2zA_ c.92.2.2 * 2.2e-31 31.3 %
:RPS:PFM   19->179 PF01497 * Peripla_BP_2 3e-10 39.4 %
:HMM:PFM   20->98 PF01497 * Peripla_BP_2 8.8e-06 32.9 79/238  
:HMM:PFM   153->211 PF01497 * Peripla_BP_2 1.8e-05 21.1 57/238  
:BLT:SWISS 17->186 BTUF_PECCP 4e-08 28.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56843.1 GT:GENE AAZ56843.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3299212..3299964) GB:FROM 3299212 GB:TO 3299964 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56843.1 GB:DB_XREF GI:71916941 LENGTH 250 SQ:AASEQ MAYDDMGFPVSVSGPARRVVSLVPSLTEAIAHTRREALVGATDWCTHPAGLDVARVRGTKNPDRAAIAALRPDLVIANKEENRELDVRMLRAAGIPVWVTVIQTVPQALDSLTRLFTEALCWPLPDWLVEARRLWSHPLPPVRARVAIPVWRDPWMVVGSATFTGDLARRLGLANVFADHPERYPKVALADIDRDDVDLVVLPDEPYAFTPQDGPEAFRCAPTVLVSGRLLTWYGPSLLHAKEGLAALVQ GT:EXON 1|1-250:0| BL:SWS:NREP 1 BL:SWS:REP 17->186|BTUF_PECCP|4e-08|28.2|170/276| SEG 187->204|valadidrddvdlvvlpd| BL:PDB:NREP 1 BL:PDB:REP 16->186|2qi9F|8e-08|30.5|164/243| RP:PDB:NREP 1 RP:PDB:REP 4->249|3be6A|2e-17|17.2|244/289| RP:PFM:NREP 1 RP:PFM:REP 19->179|PF01497|3e-10|39.4|155/235|Peripla_BP_2| HM:PFM:NREP 2 HM:PFM:REP 20->98|PF01497|8.8e-06|32.9|79/238|Peripla_BP_2| HM:PFM:REP 153->211|PF01497|1.8e-05|21.1|57/238|Peripla_BP_2| GO:PFM:NREP 2 GO:PFM GO:0005381|"GO:iron ion transmembrane transporter activity"|PF01497|IPR002491| GO:PFM GO:0006827|"GO:high-affinity iron ion transport"|PF01497|IPR002491| RP:SCP:NREP 1 RP:SCP:REP 16->186|1n2zA|2e-25|24.7|170/245|c.92.2.2| HM:SCP:REP 15->249|1n2zA_|2.2e-31|31.3|227/0|c.92.2.2|1/1|"Helical backbone" metal receptor| OP:NHOMO 84 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------1---1---------1--1------- ----1-------------------------------1----111----------------11-111-1111-----------1----------------1-111-1--11-----------------1--------11111---2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------1----1-----------------------------------------------------------------------------------------------------------------------------------1----111111111-111111-112222--111-11--1-----1-2-----1----------2111-1---------------1----------1--------------------------------1--------------------------------1--------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 98.8 SQ:SECSTR ##EcTTccEEEEEcccccEEEccTTTHHHHHTTccccEEccEEcTTccEEccccEEcccccccHHHHHHTcccEEEEcTTccccHHHHHHHHHccEEEccTTTHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccGGGccEEEEEEETTEEEEcccHHHHHHHHHTTccccHHHHTccTTcEEEcGGGGGGGcccEEEEEEccTTcccTHHHHHTTcEEEEEHHHHHcccHHHHHHHHHHHHHH# PSIPRED ccccccccEEEEcccccEEEEccHHHHHHHHccccccEEEEEcccccHHHHHcccccccccccHHHHHHccccEEEEEccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccEEEEEEccccEEEEccccHHHHHHHHHcccccHHccccccccccHHHHHHHcccEEEEccccccccHHHHHHHHccccEEEEcccHHccccHHHHHHHHHHHHHcc //