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Thermobifida fusca YX (tfus0)
Gene : AAZ56860.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:255 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   81->141 1o4tA PDBj 5e-05 32.8 %
:RPS:PDB   37->160 2d5hC PDBj 5e-11 8.9 %
:RPS:SCOP  56->156 3bu7A1  b.82.1.23 * 1e-10 10.0 %
:HMM:SCOP  51->180 1lrhA_ b.82.1.2 * 2.5e-14 27.3 %
:HMM:PFM   75->141 PF07883 * Cupin_2 2.9e-12 29.9 67/71  
:BLT:SWISS 47->156 NOEJ_RHISN 2e-05 23.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56860.1 GT:GENE AAZ56860.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3322726..3323493 GB:FROM 3322726 GB:TO 3323493 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAZ56860.1 GB:DB_XREF GI:71916958 InterPro:IPR007113 LENGTH 255 SQ:AASEQ MSAVPILEENRSATSLHIDAGPADIAELKRLTRGGARALNEQFDDDSHLNEIIPKPWGYEYRAYVDDFFDLWSLHIDVSHSTSTHAHPRKLTYLLCLSGEGVTAGLEREFPVKPGSIVRIAPGAFHSTRNTGSEALELIEVEVPRNKYDLMRLRDDYNRAGKSYESTSLVEEKFPLKPTRRLPNAKVRSGSPDGKFHFEIRTGMDVFYRRRPEDIFYIPLCVSGVVYSDIRILANSSENSRPEPDKNYLCVSRAN GT:EXON 1|1-255:0| BL:SWS:NREP 1 BL:SWS:REP 47->156|NOEJ_RHISN|2e-05|23.6|110/512| BL:PDB:NREP 1 BL:PDB:REP 81->141|1o4tA|5e-05|32.8|61/115| RP:PDB:NREP 1 RP:PDB:REP 37->160|2d5hC|5e-11|8.9|124/369| HM:PFM:NREP 1 HM:PFM:REP 75->141|PF07883|2.9e-12|29.9|67/71|Cupin_2| RP:SCP:NREP 1 RP:SCP:REP 56->156|3bu7A1|1e-10|10.0|100/355|b.82.1.23| HM:SCP:REP 51->180|1lrhA_|2.5e-14|27.3|128/0|b.82.1.2|1/1|RmlC-like cupins| OP:NHOMO 3 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 214 STR:RPRED 83.9 SQ:SECSTR #####ccccccHHHHHHTccccccHHHHHTTEEcTTcccTTcccEEETTTEEEEEEcTTTcTTHHHHccEEEEEEEcTTcEEEEEEEccccEEEEEEEEEEETccccEEEEEETTcEEEEcTTcEEEEEEEEEEEEEEEEEccTTccEHHTTTccHHHHHHHHGccHHHHHHHccccHHHHHHHHccccHTTcccccccccEEEccHHHHHHHHHHccc#################################### DISOP:02AL 183-190, 234-246| PSIPRED ccEEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccHHHccEEEcccccEEEEEEcccEEEEEEEEccccccccccccccccEEEEEEEEEEEEEccEEEEEccccEEEEccccEEEEEEcccccEEEEEEEcccccccEEEEEccccccccccEEEEEEEEccccccHHccccccEEccccccEEEEEEEcccEEEEEEccccEEEEEEHcccEEEEEEEEEEcccccccccccccEEEEEEcc //