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Thermobifida fusca YX (tfus0)
Gene : AAZ56864.1
DDBJ      :             putative membrane transport protein
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  311/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:485 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  8->171 1pw4A  f.38.1.1 * 4e-08 11.6 %
:HMM:SCOP  1->191 1pw4A_ f.38.1.1 * 1.8e-39 27.4 %
:HMM:SCOP  192->470 1pv7A_ f.38.1.2 * 4.3e-29 23.3 %
:RPS:PFM   51->170,251->352 PF07690 * MFS_1 3e-08 30.8 %
:HMM:PFM   20->319 PF07690 * MFS_1 2e-38 25.6 289/353  
:HMM:PFM   273->471 PF07690 * MFS_1 7.5e-16 24.0 179/353  
:BLT:SWISS 51->327 TCMA_STRGA 4e-16 31.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56864.1 GT:GENE AAZ56864.1 GT:PRODUCT putative membrane transport protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3325449..3326906) GB:FROM 3325449 GB:TO 3326906 GB:DIRECTION - GB:PRODUCT putative membrane transport protein GB:PROTEIN_ID AAZ56864.1 GB:DB_XREF GI:71916962 InterPro:IPR007114 LENGTH 485 SQ:AASEQ MTDASANPSRHPRLLLVAMAFAGVVTAVMQTLVVPLLPTLITAFNTTHEAVSWVVTASLIAGAVSTPVLGRLGDMYGRREVMLGALLSLVAGSLLAALSTHIPLLIVGRTLQGIALAVVPLGIGILRDVLPPERVASSSGLMSTTMGVGAAVGVPLTSLIARYADWHAVFWMSGGFGLVALLLVLAFVPRTRTRLGGRFDAVGTLGLTVVLVCFLVAVSRGSEWGWTSPLVLGLFAAALLVGVGWAYYETRIPSPVVELRSMANRGVLLSNLATLLVGFSFFVNSLVTSQLVQEPPETGYGLGYSVIVGGLCMLPASLTMLLFAPIAARIAAVRGPKTTVMFGLVLMAVGYLLRLFTSEHLVTIIVGATIVGIGTAFPYSTLPALLMQHVPREQTGAANGVNVLMRAVGQAVCSAVVAAVFGSMTMETTGGTAPTFEAYLTTFFLAACFAVAALVVTLPVRERRSGIQKNPQPSAPGATGEPQSR GT:EXON 1|1-485:0| BL:SWS:NREP 1 BL:SWS:REP 51->327|TCMA_STRGA|4e-16|31.4|271/538| TM:NTM 14 TM:REGION 16->38| TM:REGION 48->70| TM:REGION 81->103| TM:REGION 111->133| TM:REGION 139->161| TM:REGION 169->190| TM:REGION 198->219| TM:REGION 226->247| TM:REGION 269->291| TM:REGION 306->328| TM:REGION 339->360| TM:REGION 363->385| TM:REGION 401->423| TM:REGION 438->459| SEG 31->40|tlvvpllptl| SEG 83->99|lgallslvagsllaals| SEG 174->188|ggfglvalllvlafv| SEG 202->212|vgtlgltvvlv| SEG 230->244|lvlglfaaallvgvg| SEG 362->376|vtiivgativgigta| SEG 440->458|lttfflaacfavaalvvtl| RP:PFM:NREP 1 RP:PFM:REP 51->170,251->352|PF07690|3e-08|30.8|216/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 20->319|PF07690|2e-38|25.6|289/353|MFS_1| HM:PFM:REP 273->471|PF07690|7.5e-16|24.0|179/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 8->171|1pw4A|4e-08|11.6|164/434|f.38.1.1| HM:SCP:REP 1->191|1pw4A_|1.8e-39|27.4|190/447|f.38.1.1|1/2|MFS general substrate transporter| HM:SCP:REP 192->470|1pv7A_|4.3e-29|23.3|258/417|f.38.1.2|2/2|MFS general substrate transporter| OP:NHOMO 749 OP:NHOMOORG 345 OP:PATTERN ------5133333352-1111--1----------1--------121-1--111----12--211---- ---2B1-24442--43211-15--3711111166676AJC18-B-11--2111141-2--23211-2A743-----------------11-------------------------------------1--------44433---21--------------------1-----------------------16134444456415545652-3332444-----311-----3A122222222222222322251321451111133114421311221---------11-------------------------------------4311121111112133-22---------1-33322---23111-------1----------1------1--1--------------1--1--11--2---11-111--11------1111---111111111111------------------------------------22------3111131222222223323124323424--222-------------------------------12-1--------------------------2----------------------------22----1--------------111---------------------111-222------------------------------1112211-1--1-111111111112----------11111111111----12-12------2-----------------11111-------11111211-1111-111------------------------------------------------------------------------------------------------- -------------1-1----1-------------------------1-----------------------------------------------1--------1----------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-10, 459-485| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc //