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Thermobifida fusca YX (tfus0)
Gene : AAZ56895.1
DDBJ      :             Na+/solute symporter
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  376/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:537 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   46->450 PF00474 * SSF 1e-25 29.3 %
:HMM:PFM   46->456 PF00474 * SSF 4.4e-94 34.2 403/406  
:BLT:SWISS 19->533 YWCA_BACSU 5e-87 45.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56895.1 GT:GENE AAZ56895.1 GT:PRODUCT Na+/solute symporter GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3367245..3368858 GB:FROM 3367245 GB:TO 3368858 GB:DIRECTION + GB:PRODUCT Na+/solute symporter GB:PROTEIN_ID AAZ56895.1 GB:DB_XREF GI:71916993 InterPro:IPR001734 LENGTH 537 SQ:AASEQ MTDMHLAHVLDSVNPALNFSVFVAFVLVTLVIVFRASRNSKTAADYYAAGRSFSGAQNGLAIAGDYLSAASFLGICGAIAVNGYDGFLYSIGFLVAWLVALLLVAELMRNTAKFTMGDVLAFRMRQRPIRAAAALSTLAVSFFYLLAQMAGAGGLVNLLLGIEGEAAQNAIIATVGVVMILYVLIGGMRGTTWVQIIKAALLIAGAGGMTLWVLGMYGFNFSAVLADAVSMEGGKGEALLAPGAQYGINALTKLDFLSLGLALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIGLIGLFYLFTLVLGYAAGAMVGAEDISSAPGGVNSAAPLLALALGGPVLLGFIAAVAFATILAVVAGLTITASASFAHDIYSNVIKKGKTAPGSEVRVARITSLVIGAVAIVGGIFAKEQNVAFLVALAFAVAASANLPTILYTLFWKRFNTQGALWSIYGGLITTITLIVFSPAVSGSEKAMFPDLDFAFFPLSNPGIISIPLSFFLGWLGTMLSSEHDAKKHAEMEVRSLTGAGAEKAVSH GT:EXON 1|1-537:0| BL:SWS:NREP 1 BL:SWS:REP 19->533|YWCA_BACSU|5e-87|45.8|504/513| TM:NTM 13 TM:REGION 16->38| TM:REGION 61->83| TM:REGION 87->109| TM:REGION 135->157| TM:REGION 168->190| TM:REGION 202->224| TM:REGION 256->278| TM:REGION 291->313| TM:REGION 338->360| TM:REGION 388->410| TM:REGION 418->440| TM:REGION 448->470| TM:REGION 486->508| SEG 94->107|lvawlvalllvael| SEG 150->161|agagglvnlllg| SEG 196->208|iikaalliagagg| SEG 254->270|ldflslglalvlgtagl| SEG 330->345|aapllalalggpvllg| SEG 415->432|nvaflvalafavaasanl| SEG 455->464|gglittitli| RP:PFM:NREP 1 RP:PFM:REP 46->450|PF00474|1e-25|29.3|393/401|SSF| HM:PFM:NREP 1 HM:PFM:REP 46->456|PF00474|4.4e-94|34.2|403/406|SSF| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00474|IPR001734| GO:PFM GO:0006810|"GO:transport"|PF00474|IPR001734| GO:PFM GO:0016020|"GO:membrane"|PF00474|IPR001734| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00474|IPR001734| OP:NHOMO 543 OP:NHOMOORG 382 OP:PATTERN ---1-------------------1---1--11------------------------------------ --1--112111--1-------2---2------22223245----121--11-212111--222-4266332-----------1--111----------------1---------------------1-1-111-1112222----1---------------------1-11------------111------1-1111111121111111111111111112311------2-2---------------------------------------------------------------------------------------------------------------------1--12--------1--------1211---------11----------------------23222511-----------------21111-22222111-------------421-----------------------------11-1--1----2222222222222332222124222432-122111---1142-12231---22----------333-----121-1-111-4333232--22421---2--1-----1--1-------12111--11-1111111111111-1111111111111----1-1------11111111111111111-1111111111111111111111111111111111111111111111-1111--111111111111--------------1111---------------112111111-2112122211132222111---------11111-1-1-1-111--111111111111--1-------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 381-389, 512-520, 528-537| PSIPRED cccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccHHccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccc //