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Thermobifida fusca YX (tfus0)
Gene : AAZ56931.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  70/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->353 3cmnA PDBj 3e-49 43.2 %
:RPS:SCOP  211->353 3cmnA1  d.92.1.16 * 4e-14 39.2 %
:RPS:PFM   4->350 PF10103 * DUF2342 6e-60 43.7 %
:HMM:PFM   4->350 PF10103 * DUF2342 2e-119 42.1 335/342  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56931.1 GT:GENE AAZ56931.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3413215..3414324) GB:FROM 3413215 GB:TO 3414324 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56931.1 GB:DB_XREF GI:71917029 LENGTH 369 SQ:AASEQ MTLIDWDVAVNTGVRLVRPGPNISLAEARQAVAQLRELSVIAQTHVRDFTGLTSLEPAGPATIVDRPGWIRANVDGFRVVLDPVLEALGPSTLSSSPVGTITTAVGSRVTGAQLGAVLAYLAGRVLGQYELFLPPDPEGKAPTGRLTLVAPNIVQAEQELDVDPHDFRLWVCLHEETHRTQFTANPWLRGYVQQLITDYLRASHLSAGDFVERLRAVGEAVAEVIRGNEANLIDIFQTEEQSEILDRITAVMTLAEGHGDYVMDAVGPQVVPSVAEIRRRFQRRRHGGNRIDKAIRQLLGLDLKLKQYEEGAAFVRTVVARVGMANFNRVWESPDTLPTLAEIRDPQAWITRVLHPPLPLTPGEEPETE GT:EXON 1|1-369:0| SEG 278->285|rrrfqrrr| SEG 356->368|pplpltpgeepet| BL:PDB:NREP 1 BL:PDB:REP 3->353|3cmnA|3e-49|43.2|292/298| RP:PFM:NREP 1 RP:PFM:REP 4->350|PF10103|6e-60|43.7|334/340|DUF2342| HM:PFM:NREP 1 HM:PFM:REP 4->350|PF10103|2e-119|42.1|335/342|DUF2342| RP:SCP:NREP 1 RP:SCP:REP 211->353|3cmnA1|4e-14|39.2|143/294|d.92.1.16| OP:NHOMO 114 OP:NHOMOORG 78 OP:PATTERN ------------------------11111111------------------------------------ ---121-11111--22222-221121222222222212111221211-1---222211--222112222221111-------1-----------------------------------------------------11111---11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 79.1 SQ:SECSTR ##cccHHHHHHHHHHHHTGcccccHHHHHHHHHHHHHHH###HHHHHHHHTccccccccEEEEccHHHHHHHHHHHHHHTTHHHHHHHHcc###############HHHHHHHHHHHHHHHHTTcccTTccHH######HHcccEEEEcHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHTcTHHHHHHHHHHHH###################################HHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccccHHHHHHHHHHHHHcHHHHGGGGccGGGcccHHHHHcHHHHHHHH################ DISOP:02AL 90-96, 218-233, 283-292, 359-369| PSIPRED cccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHccccccccccccHHHHccHHHHHHHHHccccccccccccccc //