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Thermobifida fusca YX (tfus0)
Gene : AAZ56953.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  282/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.92.1
:322 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   117->292 3dwbA PDBj 4e-06 15.1 %
:RPS:SCOP  90->142 1sezA1  c.3.1.2 * 8e-04 20.4 %
:RPS:SCOP  161->255 1eb6A  d.92.1.12 * 1e-04 15.7 %
:RPS:PFM   115->314 PF04228 * Zn_peptidase 6e-22 32.8 %
:HMM:PFM   120->313 PF04228 * Zn_peptidase 7.5e-26 27.1 192/292  
:BLT:SWISS 113->314 YPFJ_ECOLI 3e-17 30.3 %
:PROS 205->214|PS00142|ZINC_PROTEASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ56953.1 GT:GENE AAZ56953.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3434480..3435448) GB:FROM 3434480 GB:TO 3435448 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ56953.1 GB:DB_XREF GI:71917051 InterPro:IPR006025 LENGTH 322 SQ:AASEQ MRGRNSTAAPARKRNFGSEYLLPAYTARAGPRPLGIGVSISLFMGLASVALAGFVLVASFLESGTRPLAGTAPPPADSGPAPPEGALARDILTTNPLYLSGELRPVTCPAPELDPADPESVENFLHEVTDCLDEAWGTHLSAAGLEFEPPNRIYWYTSGQSPCGTYPAEGTSAFYCHANKGLYLGVEDIVADSGHSDQAVAYTFLLGHEYGHHVQGETGILTQYQAMRSGSDGKENRDAWSRRSELQANCLSGVFLGAVENSFPVGTTEREEVLRDVALRADRGDIHTHGSPDNGQLWTKHGMDRKDPAACNTWEAREELVD GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 113->314|YPFJ_ECOLI|3e-17|30.3|198/287| PROS 205->214|PS00142|ZINC_PROTEASE|PDOC00129| SEG 69->86|agtapppadsgpappega| RP:PDB:NREP 1 RP:PDB:REP 117->292|3dwbA|4e-06|15.1|172/660| RP:PFM:NREP 1 RP:PFM:REP 115->314|PF04228|6e-22|32.8|198/263|Zn_peptidase| HM:PFM:NREP 1 HM:PFM:REP 120->313|PF04228|7.5e-26|27.1|192/292|Zn_peptidase| RP:SCP:NREP 2 RP:SCP:REP 90->142|1sezA1|8e-04|20.4|49/353|c.3.1.2| RP:SCP:REP 161->255|1eb6A|1e-04|15.7|83/177|d.92.1.12| OP:NHOMO 290 OP:NHOMOORG 282 OP:PATTERN -------------------------------------------------------------------- -11--1--111---2-----------------11113-11-1-1--21-1---1-1--------221---3----------------------------111---111-1------------------1-----------------1------------------------------------111--------------------------------------1--------1---------------------------------------------11-1---1-------------1111111111111-11---1111----------------------------------------------------11--1-----11111111-11111111111-111-1111111111--1111111111111--1--11-1----1------------1---------------------------------1111--1111111111-----11--------11-1111--1111111111111-1111--------------1111------1------------1------1--111--1---------------------1--1-----------1111---111--1-------1----------11---111111111111-1111111111111111111111----11111111111111111111-1111--111111111111------------------111111--------111111-1--11-11111111111111111-------------------1----------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 173 STR:RPRED 53.7 SQ:SECSTR ####################################################################################################################cHHHHHHHHTTccccTTcHHHHHHHHHHHHHHHHHTTTTccccTTcccccTTccccEEETTTTEEEEGGGccTTTccTTccHHHHHHHHHHHHHHHTTcTTGGGccTTcccccccccHHHHHHHHHHHHHHHHHHTTcc###cccccccTTTTHHHHHHHHHHHHHHHHHHHHccc############################## DISOP:02AL 1-13, 69-79, 100-119, 165-166, 224-240| PSIPRED ccccccccccHHHHccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHccccHHHcccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEccccEEEEcHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHcc //