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Thermobifida fusca YX (tfus0)
Gene : AAZ57012.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  112/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.102.1
:712 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   385->596 3c67A PDBj 2e-04 22.4 %
:RPS:PDB   171->692 2cqsA PDBj 3e-51 14.9 %
:RPS:SCOP  241->643 2nvpA1  a.102.1.8 * 6e-39 10.8 %
:HMM:SCOP  228->688 1v7wA1 a.102.1.4 * 6.2e-83 31.7 %
:RPS:PFM   270->632 PF06202 * GDE_C 3e-46 42.1 %
:HMM:PFM   269->633 PF06202 * GDE_C 8.3e-13 22.3 332/370  
:BLT:SWISS 460->588 TREB_MAGGR 6e-05 31.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ57012.1 GT:GENE AAZ57012.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(3489186..3491324) GB:FROM 3489186 GB:TO 3491324 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ57012.1 GB:DB_XREF GI:71917110 LENGTH 712 SQ:AASEQ MKVWNISTGTSGEGSGAVTIVEGTSFAISAGDGSMLPDHPHGVFYDDIRIVSKWEFSVDNQALEPLTVIVHDQPYQAVFLARARRGGRTSNTIFVERERRVGTGMREDITLRNMGREPAACTVTLVVDADFADLFEVKKGEPQNDGHYVFRSEGTRIIVERWWRGMQRGVIIQADDATSVAHDRITFRAVVPERGQWSTTVLVRPVVDGEDLRPRFPKEQPVDESEPARRLREWQSNTPVVSTDNDALLAVLRRSQQDVGALRIFDSRHPQRSIVAAGAPWFMALFGRDSLLTAYMALPLDPSLALGTLQTLADRQGVEENILTEEEPGRILHESRLGKESGLWLGDGTVYYGTADATPLFVILLGELSRWGADPAEIEKLLPHADRALEWIERYGDRDGDGFVEYRRRTDQGLVNQGWKDSWDGINFADGRIAEAPIALCEVQGYVYAAYLARAYLAHQTGDDQRARYWTERAADLKKAFNERFWQPELGYYAVALDHEKKPVDACTSNMGHCLWSGIVDEDKAPYVADRLLSPTMFSGWGIRTLATDMGAYDPVSYHNGSVWPHDNAIIASGLMRYGFTEHAQRVATALFEAAEHFGYRLPELFCGFDRTDYPKPVPYPTSCSPQAWAAATPIHLLRTLLRFDPWVPRGELRLAPSLPPGYTRLRIERLPIAGSQLTVDVTGDEVSVEGLPEGLRLVSEPRELDSLSLVE GT:EXON 1|1-712:0| BL:SWS:NREP 1 BL:SWS:REP 460->588|TREB_MAGGR|6e-05|31.7|120/736| SEG 446->458|yvyaaylarayla| BL:PDB:NREP 1 BL:PDB:REP 385->596|3c67A|2e-04|22.4|210/758| RP:PDB:NREP 1 RP:PDB:REP 171->692|2cqsA|3e-51|14.9|496/822| RP:PFM:NREP 1 RP:PFM:REP 270->632|PF06202|3e-46|42.1|323/370|GDE_C| HM:PFM:NREP 1 HM:PFM:REP 269->633|PF06202|8.3e-13|22.3|332/370|GDE_C| GO:PFM:NREP 2 GO:PFM GO:0004135|"GO:amylo-alpha-1,6-glucosidase activity"|PF06202|IPR010401| GO:PFM GO:0005978|"GO:glycogen biosynthetic process"|PF06202|IPR010401| RP:SCP:NREP 1 RP:SCP:REP 241->643|2nvpA1|6e-39|10.8|380/426|a.102.1.8| HM:SCP:REP 228->688|1v7wA1|6.2e-83|31.7|438/0|a.102.1.4|1/1|Six-hairpin glycosidases| OP:NHOMO 148 OP:NHOMOORG 122 OP:PATTERN -----------------1--------------------------------112-1211--1-1----- -2111----------11--------1----------2---1----1------324-----22---1141-1-----------1--------------------------------------------------------11----1-111---11----------11112--------------1------1------------------1---------1--------------------------------------------------------------------------------------------------------------------------------------1----1---11----------1--1-----1111222--1111------------1211111111------12--111111----------------------11-1-------------------------------------------1111111111-11111111-111111----------------1-----1---------------------------------1-------1111-2--------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------1--------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 679 STR:RPRED 95.4 SQ:SECSTR ###############################cccccccEEEEEEEETTTTEEEEEEEETTEEEEE#EEEEETTTTEEEEEEEEccTTcEEEEEEccEEEEETTEEEEEEEETTEEEEEEEcccEEEEcTTcccEEEEEEEEEEcEEEEEEEEEEcccccTTTccccccHHEEEcTTcEEEEEEEEEEEEccGGGccccTTccccccHHHHHHHHHTccHHHHHHHHcHHHHHHHHHTcEEEEEccHHHHHHHHTHHHHHHHHHHHHTTcccccGGccccccccccEEHHHHHHHHTTTTTcHHHHHHHHHHHHTTccTTHHHHHHccTcccccEEETTTTEETTccEcTTccccTTHHHHHHHHHHHHHHHHccGGGGGcEEcHHHHHHHHHHTcTTccTTccccccTcccTTccTTcccccTTccTTTcccccccccEEHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHcccccTEccccEEcTTccEEccTTcccccHHHTTTTccccTTcTTcHHHHHHHEETTEEccEEcccGGccTTcTTcTcEEGGGHHHHHHHHHHTTcHHHHHHHcHHHHGGGHHHHcccTTccEEEEccTTcTTTTcEEEEcccTHHHHHHHHHHHTTccEEEcccETcEEEcccccTTccEEEEcEEEETTEEEEEEEEccccTTcccEEEEEEEEcccccEEEEET# DISOP:02AL 6-7, 236-238| PSIPRED cEEEEEcccccccccEEEEEEEccEEEEEccccccccccccEEEEEccEEEEEEEEEEcccccccccEEEccccEEEEEEccccccccccccEEEEEEEEEcccEEEEEEEEEcccEEEEEEEEEEEEccHHHHHHHHccccccccEEEEEccccEEEEEEccccccccEEEEEccccccccccEEEEEEEccccEEEEEEEEEEEccccccccEEccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHEEccccccccEEEEEEHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccEEEEcccccHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccccccHHHHHHHHHHHHHHHHccEEEEccccEEEEEEccccccccEEEEEEEEccEEEEEEEEccEEEEEEEEcccEEEEcHHHcccccccc //