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Thermobifida fusca YX (tfus0)
Gene : AAZ57030.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  91/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.35.1
:777 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  248->317 1iwgA7  f.35.1.1 * 3e-05 15.9 %
:HMM:SCOP  123->358 1iwgA8 f.35.1.1 * 1e-34 32.6 %
:HMM:SCOP  536->769 1iwgA8 f.35.1.1 * 1.5e-24 26.3 %
:RPS:PFM   23->52 PF03239 * FTR1 5e-04 46.7 %
:RPS:PFM   92->317 PF03176 * MMPL 3e-17 33.6 %
:RPS:PFM   550->697 PF03176 * MMPL 9e-10 33.1 %
:HMM:PFM   68->396 PF03176 * MMPL 1.6e-63 31.9 307/333  
:HMM:PFM   549->771 PF03176 * MMPL 3.9e-53 37.9 219/333  
:BLT:SWISS 52->482,539->772 MMPLD_STRCO 1e-38 48.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ57030.1 GT:GENE AAZ57030.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3507957..3510290 GB:FROM 3507957 GB:TO 3510290 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ57030.1 GB:DB_XREF GI:71917128 InterPro:IPR000731 LENGTH 777 SQ:AASEQ MPQHTSRSAAGDTPPGPAASGQRSLLRRRAWYGAAILLILVWLFGAGPLGAFMGRLTEVQTNDESSFLPVSAESTEVSRIQEEFAQEQRVPAIIAYSADRTLTDEQLAAIGEHVAVIQDHPEISDGAAIGPMVGTEDDSVAQVVVPLREDADVGDAVEELRELLAEQPIDGVDVYVAGPAGLVADLSAAFGGIDSTLLFVALGAVLIILITVYRSPILPIVVILTAMLALVLAAALVYVAAAEEWVQLNGQSQGILFILVVGACTDYALLLVSRYRETLQENARPLEAIRTAVRGTVEPILASGGTVILGVLCLLASDLASNRGLGPVAAIGIAAALIAALTFLPAVLLLLGRVAFWPFRPVFEGEASEDTEPTETVLRRHRLWGAIATSVSRHPRRYWVATAVALLAAAAFVPQFRAEGTSDFDIFRTEVDSVVGQEVLEDGFGHAVTAQPAVIIADADHMDEVIKAAEGVDGVTEVTPLTEAPEMPGGPPAGEDGAPGGPPAGEDGAQGGPPPGVAGGSEGGADGPPPGVAGGQDTAAEPKVVDGRVLLEASLSEPAESTEAVEITRELRDAVHAVDGANALVGGPSAESLDTLDTATRDLYVVVPLVLAVVLLVLIVLLRSLVAPVLLIITTVVSFGSALGVGALVFNHLLDLPGADPGVPLFAFVFLVALGIDYNIFLVTRVREEAVNFGHREGVLRGLTVTGGVITSAGVVLAATFAALTVVPLLFLLQLAFLVAFGVLLDALIVRSLLVPALSIDVGRAMWWPSRLARGAH GT:EXON 1|1-777:0| BL:SWS:NREP 1 BL:SWS:REP 52->482,539->772|MMPLD_STRCO|1e-38|48.7|642/705| TM:NTM 11 TM:REGION 30->52| TM:REGION 181->203| TM:REGION 222->244| TM:REGION 253->274| TM:REGION 300->322| TM:REGION 332->354| TM:REGION 398->420| TM:REGION 600->622| TM:REGION 630->652| TM:REGION 664->685| TM:REGION 712->734| SEG 221->242|vviltamlalvlaaalvyvaaa| SEG 324->351|glgpvaaigiaaaliaaltflpavllll| SEG 400->411|vatavallaaaa| SEG 483->535|eapempggppagedgapggppagedgaqggpppgvaggseggadgpppgvagg| SEG 603->626|lyvvvplvlavvllvlivllrslv| SEG 698->709|gvlrgltvtggv| SEG 715->748|vvlaatfaaltvvpllfllqlaflvafgvlldal| RP:PFM:NREP 3 RP:PFM:REP 23->52|PF03239|5e-04|46.7|30/267|FTR1| RP:PFM:REP 92->317|PF03176|3e-17|33.6|223/284|MMPL| RP:PFM:REP 550->697|PF03176|9e-10|33.1|146/284|MMPL| HM:PFM:NREP 2 HM:PFM:REP 68->396|PF03176|1.6e-63|31.9|307/333|MMPL| HM:PFM:REP 549->771|PF03176|3.9e-53|37.9|219/333|MMPL| GO:PFM:NREP 4 GO:PFM GO:0016020|"GO:membrane"|PF03239|IPR004923| GO:PFM GO:0055085|"GO:transmembrane transport"|PF03239|IPR004923| GO:PFM GO:0016020|"GO:membrane"|PF03176|IPR004869| GO:PFM GO:0016020|"GO:membrane"|PF03176|IPR004869| RP:SCP:NREP 1 RP:SCP:REP 248->317|1iwgA7|3e-05|15.9|69/199|f.35.1.1| HM:SCP:REP 123->358|1iwgA8|1e-34|32.6|218/223|f.35.1.1|1/2|Multidrug efflux transporter AcrB transmembrane domain| HM:SCP:REP 536->769|1iwgA8|1.5e-24|26.3|213/223|f.35.1.1|2/2|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 213 OP:NHOMOORG 91 OP:PATTERN -------------------------------------------------------------------- ----1-11111-1-B2277-75--G8777773442412331113-111211-111111--332-1112511----------------------------------------------------------------------111-----------------------------------------------11111111-112111111-----1111--11-11212222-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-22, 57-87, 364-381, 496-509, 517-543, 775-777| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccHHHcccccHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHccccHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccEEEEEEEcccccccHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc //