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Thermobifida fusca YX (tfus0)
Gene : AAZ57034.1
DDBJ      :             ribonucleoside-diphosphate reductase
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  815/915 : Eukaryota  193/199 : Viruses  20/175   --->[See Alignment]
a.98.1c.7.1
:821 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->749 2wghB PDBj e-143 47.2 %
:RPS:PDB   84->749 2cvuA PDBj 0.0 41.0 %
:RPS:SCOP  2->209 1r1rA1  a.98.1.1 * 9e-32 21.2 %
:RPS:SCOP  210->751 1r1rA2  c.7.1.2 * e-159 30.5 %
:HMM:SCOP  1->209 1rlrA1 a.98.1.1 * 1.7e-58 49.0 %
:HMM:SCOP  210->751 1peqA2 c.7.1.2 * 7.3e-182 50.3 %
:RPS:PFM   135->205 PF00317 * Ribonuc_red_lgN 1e-13 53.5 %
:RPS:PFM   211->745 PF02867 * Ribonuc_red_lgC e-131 50.5 %
:HMM:PFM   210->746 PF02867 * Ribonuc_red_lgC 3.4e-202 48.8 529/533  
:HMM:PFM   134->207 PF00317 * Ribonuc_red_lgN 5.5e-27 44.6 74/83  
:HMM:PFM   2->73 PF03477 * ATP-cone 2.1e-05 23.5 68/89  
:BLT:SWISS 8->757 RIR1_CHLMU 0.0 58.4 %
:PROS 589->611|PS00089|RIBORED_LARGE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ57034.1 GT:GENE AAZ57034.1 GT:PRODUCT ribonucleoside-diphosphate reductase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 3514045..3516510 GB:FROM 3514045 GB:TO 3516510 GB:DIRECTION + GB:PRODUCT ribonucleoside-diphosphate reductase GB:PROTEIN_ID AAZ57034.1 GB:DB_XREF GI:71917132 InterPro:IPR000788 LENGTH 821 SQ:AASEQ MERIRKVVAEACQGLPGASAETVIAEATRGFYPGITPAELELALIMAARTFVETDPDYSYVSARLLLDKLRREALTFLSGHPDEATHADMARRYPEYLRAFITRGIELEHLTPELADFDLDRLGAALRPERDLNFTYLGLQTLYDRYFLHHEGTRYELPQAFLMRVAMGVALHEDDRNARAIEFYELLSSFDFMCSTPTLFNAGTRRPQLSSCFLTTVGDDLAEIFRAISNNALLSKYSGGLGNDWTPVRGLGAHIKGTNGKSQGVVPFLKIANDTAVAVNQGGKRKGAVCAYLETWHIDIEEFLDLRKNTGDERRRTHDMNTANWVPDLFLERVESDAQWTLFSPDEVPDLHDRYGEDFARAYVAYERAADRGEIRVFRRVRAVDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSLDEVAVCNLGSVNLANHVGPDGLDAERLRRTVRTAVRMLDNVIDVNLYTIPEAERANMRHRPIGLGLMGYQDALFTLRLPVASPEAVEFADESMELLSYYAIEASADLAAERGSYSSFEGSLWSRGILPIDSLELLAEARRGDLDVDRTQRLDWDTLREKVRTTGMRNSNVMAIAPTATIANIVGVNPSIEPLYRNLYVKANMSGDFTVVNPSLVRDLKERGLWDEEMVTALKLHDGSLGPIDRVPEDLKNLYATAFEIDPIWLVDAASRRQKWIDQAQSLNLYMAEPSGRKLDELYRRAWRKGLKTTYYLRSQGATHVEKSTLRGTDGRLNAVTPVAVSAPSPSPTPAPRPAAAPPRSAAGPAPDLTAEAAAFCAVDDPECEACQ GT:EXON 1|1-821:0| BL:SWS:NREP 1 BL:SWS:REP 8->757|RIR1_CHLMU|0.0|58.4|743/1047| PROS 589->611|PS00089|RIBORED_LARGE|PDOC00084| SEG 768->800|avtpvavsapspsptpaprpaaapprsaagpap| BL:PDB:NREP 1 BL:PDB:REP 121->749|2wghB|e-143|47.2|600/657| RP:PDB:NREP 1 RP:PDB:REP 84->749|2cvuA|0.0|41.0|639/651| RP:PFM:NREP 2 RP:PFM:REP 135->205|PF00317|1e-13|53.5|71/80|Ribonuc_red_lgN| RP:PFM:REP 211->745|PF02867|e-131|50.5|503/506|Ribonuc_red_lgC| HM:PFM:NREP 3 HM:PFM:REP 210->746|PF02867|3.4e-202|48.8|529/533|Ribonuc_red_lgC| HM:PFM:REP 134->207|PF00317|5.5e-27|44.6|74/83|Ribonuc_red_lgN| HM:PFM:REP 2->73|PF03477|2.1e-05|23.5|68/89|ATP-cone| GO:PFM:NREP 7 GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF00317|IPR013509| GO:PFM GO:0005524|"GO:ATP binding"|PF00317|IPR013509| GO:PFM GO:0006260|"GO:DNA replication"|PF00317|IPR013509| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00317|IPR013509| GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF02867|IPR000788| GO:PFM GO:0005971|"GO:ribonucleoside-diphosphate reductase complex"|PF02867|IPR000788| GO:PFM GO:0006260|"GO:DNA replication"|PF02867|IPR000788| RP:SCP:NREP 2 RP:SCP:REP 2->209|1r1rA1|9e-32|21.2|198/218|a.98.1.1| RP:SCP:REP 210->751|1r1rA2|e-159|30.5|499/516|c.7.1.2| HM:SCP:REP 1->209|1rlrA1|1.7e-58|49.0|194/0|a.98.1.1|1/1|R1 subunit of ribonucleotide reductase, N-terminal domain| HM:SCP:REP 210->751|1peqA2|7.3e-182|50.3|501/525|c.7.1.2|1/1|PFL-like glycyl radical enzymes| OP:NHOMO 1475 OP:NHOMOORG 1078 OP:PATTERN 11---11111111111-111111112221222--1--------1111-1-111-11111111111-11 2111221111111111122-211112222221222211112111111211111211111122122222222-111111--1-111221111111111--21212221121111111111111111---111--1--111--32313211-111----------11-1----------------1222211-211112221122122112121112212121211111111112111111111111111112111-1-11-2-1-11111111111111122221221111111111111122222222222221111111111---1111-111111112--11111-1112---111--1-1111111-111231211211111--1--222-2---22222222222-11-11-1121311222221222-1--121212121112111111111211112221111111111111111111111111111111111111111211211111111122222213132222211322222222243121112222221111111111111211-11111111111111131211222222211111111111111111111111111112211211111111111111111111111111-1121211-11122121222222222222-222222222222222222222222222222222222213222222222222112223222332221111111111111212212221211111-11111111111111212222111111111211111111111112112111111121122111111111111111111--11---1--1-11111111---11-11111111111---1-111111111-1 1111111-311-1111112111111111121111111111111111111111111111111122222212122222212222222211-111111211111114231141223222111111111-1112A1-112111111111111111112112111643111-111111231111H1111141251122251117 ---1-1-1--------1--1-1-11----------121-1--------------------------------------------------------------------------1-----------1---------------------------------1---1-----1111- STR:NPRED 759 STR:RPRED 92.4 SQ:SECSTR TccTTHHHHHHcTTccGGGTccTHHHHHHHcccTccccHHHHHHHHHHHHTTcccccHHHcTTTHHHHTccccccccHHHHHHcccccHHHHHHHHHHcEETTTTEEcccccHHHHHHTHHHHHHHccGGGGGGccHHHHHHHHHHTccEETTEEcccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHTTcEEEcHHHHHHTTccccccccEEEEcccccHHHHHHHHHHHHHHHTcccEEEEEcTTcccTTcccTTcccccccHHHHHHHHHHHHHHccccccccccEEEEEcTTcTTHHHHTTTTccccccTTccTTEEEEEEEcHHHHHHHHHTcEEEEccTTTcTTGGGccHHHHHHHHHHHHHTTcHcHTTccEEEEHHHHHHHHHHHHHHHcccEEEEHHHHHHTcTTGGGcccccccTTccccccccTTccEEEcEEEEEGGGGETTccEcHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccEEEEEcHHHHHHHTTccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcTTcTGGGTccGGGTcccccccHHHGGTccccccccHHHHHHHHHHHcccccccccccccTTHHHHHTcccTTcccccccccccccTccEccccHHHHHHHHHTTcccHHHHHHHHHTTTcccccTTccHHHHHHcccGGGccHHHHHHHHHHHGGGccccccccEEcccccHHHHHHHHHHHHHTTccEEccEEcccHHHHHHHHH############################################################## DISOP:02AL 767-797| PSIPRED cHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEccHHHHHHHHHHccccccHHHHHHHccHHccccHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHccccEEEHHHHcccccccccccEEcccccccccccccccccEEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccEEEcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHccccccccccccEEEEEEccccEEEccHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHccccccHHHcccccHHccccHHHHccccHHHccccccccHHHcccccccccccccc //