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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35154.1
DDBJ      :             oligopeptide ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  773/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:328 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   221->271 3dhwA PDBj 2e-05 37.5 %
:RPS:SCOP  86->327 2r6gG1  f.58.1.1 * 2e-11 13.8 %
:HMM:PFM   120->326 PF00528 * BPD_transp_1 2.6e-34 30.1 183/185  
:BLT:SWISS 1->327 APPB_BACSU 1e-47 36.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35154.1 GT:GENE AAD35154.1 GT:PRODUCT oligopeptide ABC transporter, permease protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(58839..59825) GB:FROM 58839 GB:TO 59825 GB:DIRECTION - GB:PRODUCT oligopeptide ABC transporter, permease protein GB:NOTE similar to SP:P42062 PID:677946 GB:AL009126 percent identity: 61.32; identified by sequence similarity; putative GB:PROTEIN_ID AAD35154.1 GB:DB_XREF GI:4980546 LENGTH 328 SQ:AASEQ MLAYIAKRVLYAIPLLFVISIVSFIIIELPPGDYLTTYVMTLRQSGETIDQAALEVLKKRYGLDKPVIVRYFYWIGNIITKGDFGYSFMWEKPVSDLLNQRVWWTILISVLSTAFAWVFGFLIGVYSGTHQYSIGDYVFTVLGYIGLATPNFLLALILLWFMFVTTGVSLGGLFSPEYAGAPWSWAKFVDLLKHIWIPVVVLGTGSMAGLIRVLRANLLDEINKPYVVAARARGVPERELVWKYPLRVAVIPFASTAGWALPQIVSGAVVTGIVLNLPTVGTLLLDALTSQDMYLAGSLVLILSVFTIIGTLISDILLAWLDPRIRFE GT:EXON 1|1-328:0| BL:SWS:NREP 1 BL:SWS:REP 1->327|APPB_BACSU|1e-47|36.2|312/316| TM:NTM 7 TM:REGION 9->31| TM:REGION 104->126| TM:REGION 143->165| TM:REGION 193->215| TM:REGION 241->263| TM:REGION 268->290| TM:REGION 298->320| SEG 15->27|llfvisivsfiii| RP:PDB:NREP 1 RP:PDB:REP 221->271|3dhwA|2e-05|37.5|40/203| HM:PFM:NREP 1 HM:PFM:REP 120->326|PF00528|2.6e-34|30.1|183/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 86->327|2r6gG1|2e-11|13.8|225/284|f.58.1.1| OP:NHOMO 3454 OP:NHOMOORG 833 OP:PATTERN 4431313266665552353332113336435212---1-----113-42-DA5-54432133314-1- -113B452333-4122222-2211292222224222166816154B95243489732311442295777A32333632323-411111--------2--------11--112222221221111111111111121465852216A33213332211---1--322153221-1-111-1-1195433981423666664564546445A76653655314C521222222D6155545555655556233322222342-12111--33-11112234333333311112211111112222222222222231111211111C26244434541422222111153153A-111BA53--282-3462154311----1121132HGN115854B19AAA9AA8AAL-44B43A3DPM1-iQQVJJDXSMNOK3-115CDB6BB6DF1111111122222219-------------------------------11--AEBCC68888654555559955552567D64A7113342352243C5AQ241132242-------111221346132352233331111111211----12111111------122222212213-1211643121111161111111211111121121--13221------76IC3967667777776-6676677666676566665AAAC93356566666666666666966666664-666666656666--1111111111111748333-2223322423222222121234333233657264442ABA1----1---245665555556588--1-------------12111111111-11--5-111-1--111221-222-11-22111438549E988212 -----------------------------------------------------------------------------------------------------------------1--------------------------------------------2----2---------1-----------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 40 STR:RPRED 12.2 SQ:SECSTR ############################################################################################################################################################################################################################HccTTTTTHHHHHTccTHHHHHH#####TTHHH######HHHHHHHHHHHH######################################################### DISOP:02AL 45-46| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //