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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35155.1
DDBJ      :             endo-1,4-beta-xylanase A
Swiss-Prot:XYNA_THEMA   RecName: Full=Endo-1,4-beta-xylanase A;         Short=Xylanase A;         EC=3.2.1.8;AltName: Full=1,4-beta-D-xylan xylanohydrolase A;Flags: Precursor;

Homologs  Archaea  1/68 : Bacteria  83/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
b.1.9b.18.1c.1.8d.68.2
:1059 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->192 1h6yA PDBj 2e-04 27.0 %
:BLT:PDB   207->346 1h6yA PDBj 1e-15 35.0 %
:BLT:PDB   369->691 1n82B PDBj 6e-78 49.8 %
:BLT:PDB   707->867 1i82A PDBj 1e-08 26.9 %
:BLT:PDB   871->1059 1i82A PDBj e-111 100.0 %
:RPS:PDB   76->195 1dyoA PDBj 1e-06 23.1 %
:RPS:PDB   205->353 1dyoA PDBj 2e-18 28.3 %
:RPS:PDB   370->692 2depA PDBj 1e-39 42.5 %
:RPS:SCOP  56->195 1dyoA  b.18.1.7 * 2e-09 23.8 %
:RPS:SCOP  199->354 1uwwA  b.18.1.23 * 4e-24 16.9 %
:RPS:SCOP  391->690 1b30A  c.1.8.3 * 5e-86 39.3 %
:RPS:SCOP  725->883 1g6sA  d.68.2.2 * 8e-04 19.8 %
:RPS:SCOP  871->1059 1i82A  b.1.9.2 * 9e-33 100.0 %
:HMM:SCOP  47->200 1dyoA_ b.18.1.7 * 5.9e-33 31.8 %
:HMM:SCOP  201->356 1dyoA_ b.18.1.7 * 1.2e-44 42.2 %
:HMM:SCOP  362->692 1us3A2 c.1.8.3 * 1.2e-102 44.1 %
:HMM:SCOP  700->869 1i8aA_ b.1.9.2 * 1.9e-20 25.6 %
:HMM:SCOP  871->1059 1i8aA_ b.1.9.2 * 3.5e-61 42.9 %
:RPS:PFM   57->157 PF02018 * CBM_4_9 4e-09 36.3 %
:RPS:PFM   205->334 PF02018 * CBM_4_9 6e-16 39.2 %
:RPS:PFM   396->690 PF00331 * Glyco_hydro_10 3e-72 54.1 %
:RPS:PFM   733->800 PF06452 * DUF1083 1e-04 24.5 %
:RPS:PFM   882->1038 PF06452 * DUF1083 4e-21 41.9 %
:HMM:PFM   370->691 PF00331 * Glyco_hydro_10 5.6e-126 53.7 311/320  
:HMM:PFM   731->868 PF06452 * DUF1083 2.2e-18 29.2 137/185  
:HMM:PFM   882->1058 PF06452 * DUF1083 9.9e-67 48.6 177/185  
:HMM:PFM   56->178 PF02018 * CBM_4_9 1.4e-21 36.0 114/131  
:HMM:PFM   205->338 PF02018 * CBM_4_9 1.5e-32 34.4 125/131  
:BLT:SWISS 1->1059 XYNA_THEMA 0.0 100.0 %
:PROS 601->611|PS00591|GLYCOSYL_HYDROL_F10
:TM
:REPEAT 2|46->196|200->350
:REPEAT 2|707->867|878->1057
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35155.1 GT:GENE AAD35155.1 GT:PRODUCT endo-1,4-beta-xylanase A GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 60144..63323 GB:FROM 60144 GB:TO 63323 GB:DIRECTION + GB:PRODUCT endo-1,4-beta-xylanase A GB:NOTE similar to PID:559960 SP:Q60037 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative GB:PROTEIN_ID AAD35155.1 GB:DB_XREF GI:4980548 LENGTH 1059 SQ:AASEQ MQVRKRRGLLDVSTAVLVGILAGFLGVVLAASGVLSFGKEASSKGDSSLETVLALSFEGTTEGVVPFGKDVVLTASQDVAADGEYSLKVENRTSPWDGVEIDLTGKVKSGADYLLSFQVYQSSDAPQLFNVVARTEDEKGERYDVILDKVVVSDHWKEILVPFSPTFEGTPAKYSLIIVASKNTNFNFYLDKVQVLAPKESGPKVIYETSFENGVGDWQPRGDVNIEASSEVAHSGKSSLFISNRQKGWQGAQINLKGILKTGKTYAFEAWVYQNSGQDQTIIMTMQRKYSSDASTQYEWIKSATVPSGQWVQLSGTYTIPAGVTVEDLTLYFESQNPTLEFYVDDVKIVDTTSAEIKIEMEPEKEIPALKEVLKDYFKVGVALPSKVFLNPKDIELITKHFNSITAENEMKPESLLAGIENGKLKFRFETADKYIQFVEENGMVIRGHTLVWHNQTPDWFFKDENGNLLSKEAMTERLKEYIHTVVGHFKGKVYAWDVVNEAVDPNQPDGLRRSTWYQIMGPDYIELAFKFAREADPDAKLFYNDYNTFEPRKRDIIYNLVKDLKEKGLIDGIGMQCHISLATDIKQIEEAIKKFSTIPGIEIHITELDMSVYRDSSSNYPEAPRTALIEQAHKMMQLFEIFKKYSNVITNVTFWGLKDDYSWRATRRNDWPLIFDKDHQAKLAYWAIVAPEVLPPLPKESRISEGEAVVVGMMDDSYLMSKPIEILDEEGNVKATIRAVWKDSTIYIYGEVQDKTKKPAEDGVAIFINPNNERTPYLQPDDTYAVLWTNWKTEVNREDVQVKKFVGPGFRRYSFEMSITIPGVEFKKDSYIGFDAAVIDDGKWYSWSDTTNSQKTNTMNYGTLKLEGIMVATAKYGTPVIDGEIDEIWNTTEEIETKAVAMGSLDKNATAKVRVLWDENYLYVLAIVKDPVLNKDNSNPWEQDSVEIFIDENNHKTGYYEDDDAQFRVNYMNEQTFGTGGSPARFKTAVKLIEGGYIVEAAIKWKTIKPTPNTVIGFNIQVNDANEKGQRVGIISWSDPTNNSWRDPSKFGNLRLIK GT:EXON 1|1-1059:0| SW:ID XYNA_THEMA SW:DE RecName: Full=Endo-1,4-beta-xylanase A; Short=Xylanase A; EC=3.2.1.8;AltName: Full=1,4-beta-D-xylan xylanohydrolase A;Flags: Precursor; SW:GN Name=xynA; OrderedLocusNames=TM_0061; SW:KW 3D-structure; Complete proteome; Glycosidase; Hydrolase; Repeat;Signal; Xylan degradation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->1059|XYNA_THEMA|0.0|100.0|1059/1059| GO:SWS:NREP 4 GO:SWS GO:0016798|"GO:hydrolase activity, acting on glycosyl bonds"|Glycosidase| GO:SWS GO:0008152|"GO:metabolic process"|Glycosidase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0045493|"GO:xylan catabolic process"|Xylan degradation| PROS 601->611|PS00591|GLYCOSYL_HYDROL_F10|PDOC00510| TM:NTM 1 TM:REGION 14->36| NREPEAT 2 REPEAT 2|46->196|200->350| REPEAT 2|707->867|878->1057| SEG 356->368|eikiemepekeip| BL:PDB:NREP 5 BL:PDB:REP 56->192|1h6yA|2e-04|27.0|133/157| BL:PDB:REP 207->346|1h6yA|1e-15|35.0|137/157| BL:PDB:REP 369->691|1n82B|6e-78|49.8|311/328| BL:PDB:REP 707->867|1i82A|1e-08|26.9|155/189| BL:PDB:REP 871->1059|1i82A|e-111|100.0|189/189| RP:PDB:NREP 3 RP:PDB:REP 76->195|1dyoA|1e-06|23.1|117/153| RP:PDB:REP 205->353|1dyoA|2e-18|28.3|145/153| RP:PDB:REP 370->692|2depA|1e-39|42.5|318/340| RP:PFM:NREP 5 RP:PFM:REP 57->157|PF02018|4e-09|36.3|96/131|CBM_4_9| RP:PFM:REP 205->334|PF02018|6e-16|39.2|120/131|CBM_4_9| RP:PFM:REP 396->690|PF00331|3e-72|54.1|270/294|Glyco_hydro_10| RP:PFM:REP 733->800|PF06452|1e-04|24.5|68/174|DUF1083| RP:PFM:REP 882->1038|PF06452|4e-21|41.9|155/174|DUF1083| HM:PFM:NREP 5 HM:PFM:REP 370->691|PF00331|5.6e-126|53.7|311/320|Glyco_hydro_10| HM:PFM:REP 731->868|PF06452|2.2e-18|29.2|137/185|DUF1083| HM:PFM:REP 882->1058|PF06452|9.9e-67|48.6|177/185|DUF1083| HM:PFM:REP 56->178|PF02018|1.4e-21|36.0|114/131|CBM_4_9| HM:PFM:REP 205->338|PF02018|1.5e-32|34.4|125/131|CBM_4_9| GO:PFM:NREP 8 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00331|IPR001000| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00331|IPR001000| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF06452|IPR010502| GO:PFM GO:0016052|"GO:carbohydrate catabolic process"|PF06452|IPR010502| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF06452|IPR010502| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF06452|IPR010502| GO:PFM GO:0016052|"GO:carbohydrate catabolic process"|PF06452|IPR010502| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF06452|IPR010502| RP:SCP:NREP 5 RP:SCP:REP 56->195|1dyoA|2e-09|23.8|137/156|b.18.1.7| RP:SCP:REP 199->354|1uwwA|4e-24|16.9|142/184|b.18.1.23| RP:SCP:REP 391->690|1b30A|5e-86|39.3|267/302|c.1.8.3| RP:SCP:REP 725->883|1g6sA|8e-04|19.8|131/427|d.68.2.2| RP:SCP:REP 871->1059|1i82A|9e-33|100.0|189/189|b.1.9.2| HM:SCP:REP 47->200|1dyoA_|5.9e-33|31.8|151/0|b.18.1.7|1/2|Galactose-binding domain-like| HM:SCP:REP 201->356|1dyoA_|1.2e-44|42.2|154/0|b.18.1.7|2/2|Galactose-binding domain-like| HM:SCP:REP 362->692|1us3A2|1.2e-102|44.1|322/0|c.1.8.3|1/1|(Trans)glycosidases| HM:SCP:REP 700->869|1i8aA_|1.9e-20|25.6|168/0|b.1.9.2|1/2|CBD9-like| HM:SCP:REP 871->1059|1i8aA_|3.5e-61|42.9|189/0|b.1.9.2|2/2|CBD9-like| OP:NHOMO 413 OP:NHOMOORG 141 OP:PATTERN -----------------------------2-------------------------------------- 1-3-4-----------------------------------2---312-53---1----------41-22-2--------------------1-------1-3---2B1------------------------------------1----1-----11--------1-112------------------35-1------------------1--1------2-----------5------------------------------------------------------------------------------------------5--2-----------9-------5-5--------------------6-----12222-----1-1----1-1----------------------1-----11-11-111----2-------------------------------------------------------------------------------------------------------1-----------------------------------------------------------6----------------------------------4--1------------------------------------------------------------------------------------------------------------------------------------1----------------------------4---------------11--------------------------32322111----------------------------------------------------1--31232-4- ------1--------127434424244-------------------2212543544663444------------1--------------632255------52-----2-5----------------------------------------------------C7--------1---1-------2A754B2116375- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1001 STR:RPRED 94.5 SQ:SECSTR #######################################################ccccccTTcEEEcccEEEccEcccccccccEEEEEccccTTcEEEEEEcTTccTTcEEEEEEEEEcccccccEEEEEEEEEEcGGGccGGGGcTTcccTTcEEEEEcccGGGGTccccccEEEccccTTccGGTccccTTccccTTcEEEEEEEEEEccGGGTTcEEEEEEccEEcEEEEEETTEEEEEEEcccccEEEEcGGGccccEEEEEccccEEccEEcccEEEEEEccEEEEEEEEEEEcTTTcccccccEEEEEEEEcTTccEEEEEEEEEcccccEEEEEcccEEETTcccccccccccEEEEEEEHHHHTTTTccEEEEEcGGGGccHHHHHHHHHHccEEEEccTTcHHHHEETHcccTTccccHHHHHHHHHHHHTTcEEEEEEEEEcccccGGGGccTTcccHHHHHHHHHHHHHHHHHHHHHTTTccEEEEEEccccTTcGGGccccHHHHHHTTHHHHHHHHHHHHHHccccEEEEEEcTTcHHHHHHHHHHHHHHHHTTcccEEEEccEEEcccccHHHHHHHHHHHHTTTcEEEEEEEEEEcccTTccccccccccHHHHHHHHHHHHHHHHHTTGGGEEEEEEccccTTccGGccccccccccccTTccccHHHHHHHccGGGcccTTEEcEEEcccccGGGccEEcTTccEEETTTEEEEEccccTTccEEEEEccccGGGcEEEcTTccEEETTTccEEEEGGGcccTTccEEEEcccEEEEcccccccccccccccccEEccEEEEEccccccTTEEEEEEEEEEEEcTEEEcccccccTTTcGGGcEEEEE###cEEEEEEccccccccccGGGGGccEEEccEEEEccTTTccEEEEEEEEcccEEEEEEEEEccccccccccGGGccEEEEEEETTccccccccTTEEEEEEETTccEEEcTTccGGGEEEEEEEETTEEEEEEEEEcccccccTTEEEEEEEEEEEEcTTccEEEEEEcccccccTTTcGGGcEEEEEEc DISOP:02AL 1-6, 704-712| PSIPRED ccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccEEEEccccccccccEEccccEEEEEEcccccccEEEEEEEEcccccccEEEEEccEEEcccEEEEEEEEEEcccccEEEEEEEEEEccccEEEEEEEEEEEEccEEEEEEEEEEEcccccccEEEEEEEEccccccEEEEcccEEccccccccccEEccccccccccccccccEEEEEEcccccccccEEEEEEccccccccEEEEccEEEEccEEEEEEEEEEccccccEEEEEEEEEEcccccEEEEEEcEEEEEcccEEEEEEEEEEcccccccEEEEEEEEccccEEEEEEEEEEEEccccccccccccccccHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccEEEEEcccccccccccccccccEEcHHHHHHHHHHHHHcccEEEEEEEEEcccccccEEEccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccEEcccccccccEEEcccccccHHHHHHHHHHHcccccccccccccccccccccccHHccccccEEEcccccccccEEEEEEcccEEEEEEEEcccccccccEEEEEEEcccccccccccccEEEEEEEcccccccccEEEEEEEEEccccEEEEEEEEEccccccccccEEEEEEEEEEcccEEEEEcccccccccHHHccEEEEccEEEEEEEccccEEcccHHHHcccccEEEEEEEEEEEccccccEEEEEEEccccEEEEEEEEEHHHcccccccccccEEEEEEEccccccccccccccEEEEEEccEEEEcccccccEEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEEEccccccEEEEEEEEEEcccccccccccEEEEEEEc //