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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35165.1
DDBJ      :             oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  323/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:625 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->601 2o7iA PDBj 4e-29 30.0 %
:RPS:PDB   41->615 3dp8B PDBj 4e-58 20.2 %
:RPS:SCOP  41->615 1xocA1  c.94.1.1 * 2e-56 20.3 %
:HMM:SCOP  24->613 1vr5A1 c.94.1.1 * 2.6e-89 28.0 %
:RPS:PFM   77->384 PF00496 * SBP_bac_5 1e-23 35.7 %
:HMM:PFM   76->517 PF00496 * SBP_bac_5 5.4e-78 31.0 364/372  
:BLT:SWISS 81->547 Y4WM_RHISN 2e-17 29.2 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35165.1 GT:GENE AAD35165.1 GT:PRODUCT oligopeptide ABC transporter, periplasmic oligopeptide-binding protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 72312..74189 GB:FROM 72312 GB:TO 74189 GB:DIRECTION + GB:PRODUCT oligopeptide ABC transporter, periplasmic oligopeptide-binding protein GB:NOTE similar to PID:1143602 percent identity: 84.56; identified by sequence similarity; putative GB:PROTEIN_ID AAD35165.1 GB:DB_XREF GI:4980559 LENGTH 625 SQ:AASEQ MKKFLVVLFVVSMFSLFFAQLPPNIPRNETFIAQVLTGRAANPTNFNVWTGWVWQDRGIQNLLLEPLWYVDFATGKIISALAESLPTYNSDFTELTIKLRKGVYWSDGEPFTADDVVFTIETIMSTPAFGYHQELVNEVESVEKLDDYTVKIKLKRPNARFHAYFIDRWGGIRPMPKHVFEKVEDPVNFEFNPPVGTGPYVLHSVDPGGYWTLWQRREDWERTPTGMLFGMPQPKYVLFIDYGSPEKQVLAMAQHQLDEAILTIEALKAVLNRVKTARAWRKNFPWTVNNDPCVTGFVFNTAKEPFNNIEVRWALTLAIDIVEYAANAFDGAVTLSPIHIPLSTAYYNWYFTRLEDWLKNYEIDLGNGEKFKPYDPEAGLRLAEYAKKRGYSVPDSPEIIKRTFGPGWWKYAPDVAAKLLEKNGFYRDKNGKWHLPNGDLWQITIIAPTNPSDPAYRNAFALSQAWKKFGIDAVVQTSENANSFGAEGNFDVHTAWPAAEPWGGHPDLYRTLYPFHSEYVVPIGEDAPWGNYCRWSDPRLDKIIEELKNTPWGNTQKLIELGTEALKIIVEGLPSVPTFNYPGVIAWDEYYWTNYPGAENPYTQPYQHWPNFKYMLPFLKPTGRK GT:EXON 1|1-625:0| BL:SWS:NREP 1 BL:SWS:REP 81->547|Y4WM_RHISN|2e-17|29.2|408/663| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 250->277| TM:NTM 1 TM:REGION 4->26| SEG 1->18|mkkflvvlfvvsmfslff| BL:PDB:NREP 1 BL:PDB:REP 24->601|2o7iA|4e-29|30.0|507/582| RP:PDB:NREP 1 RP:PDB:REP 41->615|3dp8B|4e-58|20.2|485/497| RP:PFM:NREP 1 RP:PFM:REP 77->384|PF00496|1e-23|35.7|277/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 76->517|PF00496|5.4e-78|31.0|364/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 41->615|1xocA1|2e-56|20.3|483/504|c.94.1.1| HM:SCP:REP 24->613|1vr5A1|2.6e-89|28.0|510/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 758 OP:NHOMOORG 352 OP:PATTERN 11-1----1233111-1----------------1---------1-3-13-A54-32211-111-2--- --1-1-3-111----------------------111-2-----21351---1---1----111-322-221--------1--21-11-------------------------------------------------12222---161221221----------11--3241----111----132-1177-51111111111-1-11113-111-11121214--11111164---------------------------------------------1111-1-1--------------------------------------51-13331323-3--211------1213--1-42411--2--125--21-1-------1--1-86D-114123111111112117---3--4-375--HAA79759995363---2222222-32------------1--1-----------------------------------232221----11------1---------34-21--111--1111-3-16----1-1----------------23-1--2--1112-1111--111----14-111-1--1-----1-------11-11--21--------1------------------------11-------124-1-------------------------------22234--1-----------1-1----------1-211111111111---------------1-1333-1-1-----11-------3----3----12-1-2421-2121-11-11----1122222233244----------------1-11------------2---------------------------31322868661-- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 597 STR:RPRED 95.5 SQ:SECSTR #####################ccccccccEEEEEEccccccccccccTTccTHTccHHHHHHHccccEEEcTTTccEEEccEEEEEEEcTTccEEEEEEccccccTTcccccHHHHHHHHHHHHTTGGGGTTcHHHHHEEEEEEccccEEEEEEccccTTHHHHHccTcccccccccGGGccccccTTccTccccccccEEEEEEETTTEEEEEEcTTccccccTTHHGccccccEEEEEEcccHHHHHHHHHTTcccEEcEEEEETTcccHHHHHHHHTcTTcEEEEccccEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHTTTccccccccccccTTcTTcccTcHHHHcHHHcHHHHHHcccccccccHHHTcccTTcccEEEEccTTEEEEHHcHHHHccHHHHHHHHHHHHHHTTccccTTccccEETTEEcEEEEEEETTccHHHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHHHHTcccEEEEEcccTTTTTHHHccHHGGGccccHHHHcTTHHHTTTcTTHHHHHHHHHHHHHccGGcHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEETTEGcccGGGccccccccTTcccGGGcccE####### DISOP:02AL 25-27, 622-625| PSIPRED cHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHEEcccccEEccHHHHccccccccccEEEEEEccccEEcccccccHHHHHHHHHHHHccccccHHHHHHHHHcEEEEEccEEEEEEEccccHHHHHHHHHHccccccccHHHHcccccccccccccccccccEEEEEEEcccEEEEEEcccccccccccccccccEEEEEEEEEEccHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccccEEEccccEEEEEEEEccccccccHHHHHHHHHHccHHHHHHHHHHcccEEEccccccccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccEEccccEEEEccccEEEEEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEEcEEEEcccccccccccccccccccHHHHHcccccccc //