[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermotoga maritima MSB8 (tmar0)
Gene : AAD35173.1
DDBJ      :             iron(III) ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  623/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:322 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   49->318 2nq2A PDBj 1e-33 34.1 %
:RPS:SCOP  45->321 1l7vA  f.22.1.1 * 1e-56 31.2 %
:HMM:SCOP  4->321 1l7vA_ f.22.1.1 * 1.4e-68 41.2 %
:RPS:PFM   22->320 PF01032 * FecCD 4e-48 41.6 %
:HMM:PFM   8->320 PF01032 * FecCD 5.3e-91 42.3 310/311  
:BLT:SWISS 28->318 Y087_METJA 1e-38 32.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35173.1 GT:GENE AAD35173.1 GT:PRODUCT iron(III) ABC transporter, permease protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(82213..83181) GB:FROM 82213 GB:TO 83181 GB:DIRECTION - GB:PRODUCT iron(III) ABC transporter, permease protein GB:NOTE similar to GB:AE000782 percent identity: 60.69; identified by sequence similarity; putative GB:PROTEIN_ID AAD35173.1 GB:DB_XREF GI:4980567 LENGTH 322 SQ:AASEQ MRKLVFPILILSFLLGIFFGSVPLDPLEVLGVLFGLKENPGVERILSLRIPRVLASFLVGAGLSIVGNSFQNLLKNPLVDPYLLGISSGASFGTVVSFYLAETLGISWIYRIPLLSFGFSMIASLLTLLIARKEGRFPVTTIVLSGVVVSTLFSSLTYMTIVLLKRNVTTISMWLFGSFSGSTWEDVLFYLMVVIPFLLYSLIFSKHLNAMALGEEEAFILGVSVERLKVVTFLFGNLITAFLVSRSGVIGFVGLIVPHISRYLVGPNFLKSVLSSLIVGGVLLTLCDTAARTFFSPTELPVGVVTALIGAPFLAFLMKRGV GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 28->318|Y087_METJA|1e-38|32.9|289/349| TM:NTM 9 TM:REGION 10->32| TM:REGION 53->75| TM:REGION 82->104| TM:REGION 110->131| TM:REGION 140->162| TM:REGION 184->206| TM:REGION 229->251| TM:REGION 269->291| TM:REGION 297->318| SEG 8->21|ililsfllgiffgs| SEG 270->286|lksvlsslivggvlltl| BL:PDB:NREP 1 BL:PDB:REP 49->318|2nq2A|1e-33|34.1|261/308| RP:PFM:NREP 1 RP:PFM:REP 22->320|PF01032|4e-48|41.6|296/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 8->320|PF01032|5.3e-91|42.3|310/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 45->321|1l7vA|1e-56|31.2|272/324|f.22.1.1| HM:SCP:REP 4->321|1l7vA_|1.4e-68|41.2|306/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 2487 OP:NHOMOORG 679 OP:PATTERN --2-1-1111111111-1-1-112233313211--321212131164854C81-2222342111---- ----246499B6651-1----1---3----------3A46-2132321232-7311132212-68642694--------1221-----22111222---1-11111122----------------13122111223133111137-5-2222-11--------32-1451-------------2321122-168DDEDECDD7EDEEEDA9AABAEEE577C754444444HG499898988999999655664-1----1---33-1--2-----1114442222111222222222222222222222222222111222223B4699998995B6252227564511-521-2CA2--312223222-5141----122112211--1345443433333333337-21-11122322-6777453565743112-23A1-1122-22222222-331--41-------------------------------1--21222222222423333111-333323311-112--111-2---3-3--111111-141--1------1-11-66222123-3111----1---2411--11341253-22222----------211--22464231112211233121221131233322---1121------G4772965779588853-6563779375697555553AABAB7755355555555555555833744453-466666656666--2-----------185D333364--1111--51122111-33213423232522322-466---------15565445449693311---------------111------------5-1-------------------------1121122222--1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 85.1 SQ:SECSTR ############################################GGGTHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTTTTcHHHHHHHHHHHHHHTTTTccHHHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHcccTHTTTHHHHHHHHTTcccTTccHHHHHHHHHHHHHHHHHHHHTTTGGGGGGccHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHccccccTTHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHH#### PSIPRED cHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcc //