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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35188.1
DDBJ      :             general secretion pathway protein F, putative
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  485/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
:399 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->164 2vmbB PDBj 4e-11 30.8 %
:BLT:PDB   264->354 2vmbB PDBj 9e-11 33.7 %
:RPS:PDB   56->164 3c1qA PDBj 1e-16 24.5 %
:RPS:PDB   256->361 3c1qA PDBj 3e-11 28.3 %
:RPS:PFM   67->168 PF00482 * GSPII_F 9e-10 33.0 %
:RPS:PFM   269->386 PF00482 * GSPII_F 6e-11 25.4 %
:HMM:PFM   65->188 PF00482 * GSPII_F 6.9e-32 31.7 123/124  
:HMM:PFM   267->387 PF00482 * GSPII_F 2.2e-25 26.4 121/124  
:BLT:SWISS 1->393 GSPF_PECCC 9e-38 30.8 %
:TM
:REPEAT 2|62->162|264->361
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35188.1 GT:GENE AAD35188.1 GT:PRODUCT general secretion pathway protein F, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(97910..99109) GB:FROM 97910 GB:TO 99109 GB:DIRECTION - GB:PRODUCT general secretion pathway protein F, putative GB:NOTE similar to GB:AE000657 percent identity: 58.04; identified by sequence similarity; putative GB:PROTEIN_ID AAD35188.1 GB:DB_XREF GI:4980584 LENGTH 399 SQ:AASEQ MPFYKYVAVEGSGKKITGVIEAENKLKAISILSERGLMVVRVEERKKAQRSSTFFQISISEIATFCRQLSIMISAGIRIKEALNILARQTVFSRRFRKVILEIALNVETGDSLAEAFRKTGVFDNVLISMLEAGEEGGVLDRTLKRAADFYESIKRLQDEVKSAMAYPLFVLFFAVVIVLVISFYILPNLVRAFGTSIPLSPTIRSLLKANEFLSENWPWFSVLVTGIIAGIFVLMKSKYGVYIKEYLSFIFPPVRKLRQNMGLERFARTLGILVGSGVRITDAIKMAAQASSSPSIIRKTEEMVRKISEGKTLRDTFAESGVFPQLIYEMIGTGEETGKVDEVMERVADFYEDIVKNSVKQLVSLVEPLLIAGVGGFVAFLAYSIYTTVFQLQRSIGG GT:EXON 1|1-399:0| BL:SWS:NREP 1 BL:SWS:REP 1->393|GSPF_PECCC|9e-38|30.8|389/408| TM:NTM 3 TM:REGION 169->191| TM:REGION 216->237| TM:REGION 365->387| NREPEAT 1 REPEAT 2|62->162|264->361| SEG 169->182|lfvlffavvivlvi| BL:PDB:NREP 2 BL:PDB:REP 57->164|2vmbB|4e-11|30.8|107/115| BL:PDB:REP 264->354|2vmbB|9e-11|33.7|91/115| RP:PDB:NREP 2 RP:PDB:REP 56->164|3c1qA|1e-16|24.5|106/111| RP:PDB:REP 256->361|3c1qA|3e-11|28.3|104/111| RP:PFM:NREP 2 RP:PFM:REP 67->168|PF00482|9e-10|33.0|98/124|GSPII_F| RP:PFM:REP 269->386|PF00482|6e-11|25.4|118/124|GSPII_F| HM:PFM:NREP 2 HM:PFM:REP 65->188|PF00482|6.9e-32|31.7|123/124|GSPII_F| HM:PFM:REP 267->387|PF00482|2.2e-25|26.4|121/124|GSPII_F| OP:NHOMO 849 OP:NHOMOORG 489 OP:PATTERN -------------------------------------------------------------------- 122-------------------------------------1---1---1----1--------1-----------------2-122311-------------11---1-11111111111111111----------------111--111111111111-111111211111-1--1-11--1-1112122111------1------1-----------111--11-------1--------------------------------------------------------------------------------1---------11112111111-21212222222-11-1-12231132212211111111-1241111-----1--11----1--1--------------1-21---1--1-----1-------122----------------------1--------------------------------1-111-11---1111122111111121111112222222--2255232232232321354432111111113224342333121--12111-33343335322222232-111--1111----------1132211322344334323333333333333333343--12223------2121--12222233313-2222223222232322332121111--111111111111111122211111--312222222222--12-----22222231-111--111111111-2322212121132343323423132223211111111122333333333333322333332222222--1-111111------------------------------------1111111111-31 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 55.9 SQ:SECSTR #######################################################cccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHTcccccHHHHHHHHHHHHHHTTccHHHHHTTcTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHTTcHHHH#######################################################################################cccccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHHHHHTTccHHHHHTTcTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHH################################## DISOP:02AL 42-58| PSIPRED cccEEEEEEcccccEEEEEEEcccHHHHHHHHHHcccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //