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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35200.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.3e.8.1f.1.1
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   157->237 1t3nA PDBj 2e-04 27.2 %
:BLT:PDB   342->373 2ht5A PDBj 8e-04 43.8 %
:RPS:PDB   148->352 3c5gB PDBj 6e-09 16.8 %
:RPS:SCOP  157->232 1t3nA2  e.8.1.7 * 2e-08 27.6 %
:RPS:SCOP  308->385 1colA  f.1.1.1 * 9e-07 8.2 %
:HMM:SCOP  172->232 1t3nA2 e.8.1.7 * 4.1e-07 36.1 %
:HMM:SCOP  295->387 1noyA_ c.55.3.5 * 3.9e-10 31.0 %
:RPS:PFM   9->161 PF01930 * Cas_Cas4 1e-04 28.8 %
:HMM:PFM   7->159 PF01930 * Cas_Cas4 1.4e-06 23.3 150/162  
:HMM:PFM   172->199 PF10391 * DNA_pol_lambd_f 2e-05 46.4 28/52  
:HMM:PFM   307->392 PF06889 * DUF1266 0.00068 20.0 85/234  
:BLT:SWISS 174->207 MUCB_SALTY 1e-04 50.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35200.1 GT:GENE AAD35200.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(111716..112900) GB:FROM 111716 GB:TO 112900 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE similar to PID:1651854 percent identity: 51.72; identified by sequence similarity; putative GB:PROTEIN_ID AAD35200.1 GB:DB_XREF GI:4980596 LENGTH 394 SQ:AASEQ MTISYEDVENFLVCPRRYYLSKKISKEVSPNFSEELMEAGFPLENPVIVCEFEGHELVSNPDLIVKDRDGWRIILRKSAKRFKDKYILESAYHALVFSRAGLEVSGVEIVSDSFSRKMENWKNLIPIVEDVLREMLTIDDDPHPRVGRHCRYCDFLEDCEGKFFEEKSLLLVNGIGEETYRVLYGMGIETLEDLAEADQRILEKVFGKEKGKRFVMAARAFLENRVIMITPPEDLPEGTIVDIEYHPSEERDFLYGFLIGDEYRYFLEEDQGDLIAFLNSLDDESVFYHYHGPEKRKLISLIGRNKRMNFLDVFTILRNHFVFPVMSYSLKRIAKYLGYDWRTSLNGYEILRLYEKWKKTRNEELLKQMLLYNEDDVRATKLVLDFMRSYSSFS GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 174->207|MUCB_SALTY|1e-04|50.0|34/421| BL:PDB:NREP 2 BL:PDB:REP 157->237|1t3nA|2e-04|27.2|81/388| BL:PDB:REP 342->373|2ht5A|8e-04|43.8|32/387| RP:PDB:NREP 1 RP:PDB:REP 148->352|3c5gB|6e-09|16.8|197/329| RP:PFM:NREP 1 RP:PFM:REP 9->161|PF01930|1e-04|28.8|146/158|Cas_Cas4| HM:PFM:NREP 3 HM:PFM:REP 7->159|PF01930|1.4e-06|23.3|150/162|Cas_Cas4| HM:PFM:REP 172->199|PF10391|2e-05|46.4|28/52|DNA_pol_lambd_f| HM:PFM:REP 307->392|PF06889|0.00068|20.0|85/234|DUF1266| RP:SCP:NREP 2 RP:SCP:REP 157->232|1t3nA2|2e-08|27.6|76/273|e.8.1.7| RP:SCP:REP 308->385|1colA|9e-07|8.2|73/197|f.1.1.1| HM:SCP:REP 172->232|1t3nA2|4.1e-07|36.1|61/0|e.8.1.7|1/1|DNA/RNA polymerases| HM:SCP:REP 295->387|1noyA_|3.9e-10|31.0|84/0|c.55.3.5|1/1|Ribonuclease H-like| OP:NHOMO 40 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- --1-----------------------------------------------------------------------------------------------------------------------------------------------111111111111-----11--1111111-11111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 57.4 SQ:SECSTR ###################################################################################################################################################HHHcccGGGGcccTTHHHHHHHHTcTTccHHHHHHHHHTTcccHHHHHHHccccHHHHHHHHHTHHHHHccEEHHHHHHHHHHHHHHHTTcHTTcTTcEEEEcHHHHTTccEEccEEEEEEcTTccTTTTHHHHHHTEEcccccccEEEEEEEcccTTccEEEEEEEEccGGGHHcHHHHHHHHHHHHHTTEEEccEEccccEEEcTTccTcccccEEEEEEEEEE##################### DISOP:02AL 17-29,31-32| PSIPRED ccccHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHcccccccEEEccccEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEcccccEEEccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccHHHcccccHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccccccccccHHHccHHHHHHHcccccccHHccHHHHHHHHHHccccccEEEcccHHHHHHHHHHHcccccccEEEEEHHHccEEEcccccccHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //