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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35309.1
DDBJ      :             glycyl-tRNA synthetase, beta subunit
Swiss-Prot:SYGB_THEMA   RecName: Full=Glycyl-tRNA synthetase beta subunit;         EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit;         Short=GlyRS;

Homologs  Archaea  0/68 : Bacteria  671/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
a.211.1a.27.1
:672 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   326->488 2cqzA PDBj 3e-11 12.5 %
:RPS:SCOP  331->448 1xx7A  a.211.1.1 * 6e-08 21.9 %
:RPS:SCOP  579->631 1f4lA1  a.27.1.1 * 3e-04 24.5 %
:RPS:PFM   5->531 PF02092 * tRNA_synt_2f e-100 38.4 %
:RPS:PFM   583->656 PF05746 * DALR_1 3e-05 29.7 %
:HMM:PFM   5->532 PF02092 * tRNA_synt_2f 2.8e-173 43.0 525/549  
:HMM:PFM   566->654 PF05746 * DALR_1 2e-10 23.6 89/119  
:BLT:SWISS 1->672 SYGB_THEMA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35309.1 GT:GENE AAD35309.1 GT:PRODUCT glycyl-tRNA synthetase, beta subunit GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 231422..233440 GB:FROM 231422 GB:TO 233440 GB:DIRECTION + GB:PRODUCT glycyl-tRNA synthetase, beta subunit GB:NOTE similar to SP:P54381 PID:1303829 GB:AL009126 percent identity: 57.04; identified by sequence similarity; putative GB:PROTEIN_ID AAD35309.1 GB:DB_XREF GI:4980715 LENGTH 672 SQ:AASEQ MRTALLEVGLEELPASEFHSILKQLEEKSAELLKAYRVSSGSVEVFVGSRRFGVILKNLPERQEDFTEEKKGPPLNVAYDENGKPTRALEGFLRNNNASLENVVHREGYVYLSRVVEGKPVEEVLPDLFRDLVLGLNFRKPMRWGSGEHEYIRPVHWIVAMVDGRVLDLEIFGLRSSRISYGKRYHAGSIEIPDSERYYESLKKGFVISSHLERKKFVLEQIDEFEKRSSMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIAHKGTLTNTFVAFQDGPQPPENVVKGYERVINARLEDARYYFQKDLETPLEKMNEKLKEIVFQEKLGTLYDKVERIKKISQRLCEDLKLPGSFTQKVLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYSEEPQTVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDISLEELLTFASSLVGYRLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILSAEALQEISEKPEFQDLFVGFERVHNITKNHDSTKFDGALFEKEEEKKLMNKFYEVKEKVLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFMMVGDMTYLVKRSQV GT:EXON 1|1-672:0| SW:ID SYGB_THEMA SW:DE RecName: Full=Glycyl-tRNA synthetase beta subunit; EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS; SW:GN Name=glyS; OrderedLocusNames=TM_0217; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->672|SYGB_THEMA|0.0|100.0|672/672| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 37->51|rvssgsvevfvgsrr| RP:PDB:NREP 1 RP:PDB:REP 326->488|2cqzA|3e-11|12.5|160/173| RP:PFM:NREP 2 RP:PFM:REP 5->531|PF02092|e-100|38.4|523/547|tRNA_synt_2f| RP:PFM:REP 583->656|PF05746|3e-05|29.7|74/118|DALR_1| HM:PFM:NREP 2 HM:PFM:REP 5->532|PF02092|2.8e-173|43.0|525/549|tRNA_synt_2f| HM:PFM:REP 566->654|PF05746|2e-10|23.6|89/119|DALR_1| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02092|IPR002311| GO:PFM GO:0004820|"GO:glycine-tRNA ligase activity"|PF02092|IPR002311| GO:PFM GO:0005524|"GO:ATP binding"|PF02092|IPR002311| GO:PFM GO:0005737|"GO:cytoplasm"|PF02092|IPR002311| GO:PFM GO:0006412|"GO:translation"|PF02092|IPR002311| GO:PFM GO:0006426|"GO:glycyl-tRNA aminoacylation"|PF02092|IPR002311| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF05746|IPR008909| GO:PFM GO:0005524|"GO:ATP binding"|PF05746|IPR008909| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF05746|IPR008909| RP:SCP:NREP 2 RP:SCP:REP 331->448|1xx7A|6e-08|21.9|114/172|a.211.1.1| RP:SCP:REP 579->631|1f4lA1|3e-04|24.5|53/160|a.27.1.1| OP:NHOMO 696 OP:NHOMOORG 687 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------111--------------111---1-------------1111-11111----------------------111111111111111---------------------1111111111111111111111111111111111111-----111--1---------------111111-------11111111111--------------------1111111111111111111111111111111111111111111111111111111111111111111111----------------1---------111--111111111111----111-1-111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111------------------------------------------1111111111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------11117111111121-2-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 160 STR:RPRED 23.8 SQ:SECSTR #####################################################################################################################################################################################################################################################################################################################################HHHGGGGTcccHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHTTTTHHHHccccTTTTTTccHHHHHHHHHHHTcGGGHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHTTccccGGGGGHHH###HHHTcGGGGGGHHHHH######################################################################################################################################################################################## PSIPRED cccHHEEHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEEcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHEEcccEEEEEEEcccccHHHHHHHHHHHHHHHcccccEEEcccccEEEEcHHHHHHHHHcccEEEEEEccEEEccEEEEcccccccEEEccHHHHHHHHHHccEEEcHHHHHHHHHHHHHHHHHHcccEEEccHHHHHHHHHHHHccEEEEEEEcHHHHcccHHHHHHHHHHccEEEEcccccccccEEEEEcccccHHHHHHccHHHcccHHHHHHHHHHHHHcccHHHHHHHHHccEEEHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcc //