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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35319.1
DDBJ      :             NADP-reducing hydrogenase, subunit C
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  559/915 : Eukaryota  169/199 : Viruses  0/175   --->[See Alignment]
a.29.12c.142.1c.47.1d.15.13
:545 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   18->92 1m2bA PDBj 2e-04 34.7 %
:BLT:PDB   111->526 3i9v1 PDBj 2e-92 41.6 %
:RPS:PDB   1->80 2auvA PDBj 4e-06 21.8 %
:RPS:SCOP  5->99 1f37A  c.47.1.11 * 3e-13 26.3 %
:RPS:SCOP  108->343 2fug12  c.142.1.1 * 3e-85 47.5 %
:RPS:SCOP  345->428 2fug13  d.15.13.1 * 8e-17 31.7 %
:RPS:SCOP  431->529 2fug11  a.29.12.1 * 5e-17 34.7 %
:HMM:SCOP  1->100 1f37A_ c.47.1.11 * 2.2e-14 28.0 %
:HMM:SCOP  103->344 2fug12 c.142.1.1 * 2.1e-97 59.1 %
:HMM:SCOP  345->428 2fug13 d.15.13.1 * 2.5e-22 46.3 %
:HMM:SCOP  429->532 2fug11 a.29.12.1 * 9.7e-36 46.2 %
:RPS:PFM   152->310 PF01512 * Complex1_51K 1e-48 63.5 %
:RPS:PFM   434->478 PF10589 * NADH_4Fe-4S 1e-13 60.0 %
:HMM:PFM   152->324 PF01512 * Complex1_51K 2.1e-56 49.7 151/151  
:HMM:PFM   433->478 PF10589 * NADH_4Fe-4S 1.2e-23 54.3 46/46  
:HMM:PFM   346->392 PF10531 * SLBB 1.9e-11 40.4 47/59  
:BLT:SWISS 26->92 FER2_CLOPA 2e-05 38.8 %
:BLT:SWISS 112->525 NUOF2_RHIME e-108 46.1 %
:PROS 446->457|PS00645|COMPLEX1_51K_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35319.1 GT:GENE AAD35319.1 GT:PRODUCT NADP-reducing hydrogenase, subunit C GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 241962..243599 GB:FROM 241962 GB:TO 243599 GB:DIRECTION + GB:PRODUCT NADP-reducing hydrogenase, subunit C GB:NOTE similar to GB:U07229 PID:466365 percent identity: 72.27; identified by sequence similarity; putative GB:PROTEIN_ID AAD35319.1 GB:DB_XREF GI:4980726 LENGTH 545 SQ:AASEQ MKPITVLVSVDSNSVLMGARHFLNYFRDLVKEHNLEDTVDVLETGSMGIYPEGVIVSVLPDGVFYVVRNELDVRRIFEEHILKGRRVLDLEIPESQIKGTVEVEKVAEETRIVLKNVGEIDPTRIEEYIARDGYFALAKALQMEPGEIIEEIKRSGLRGRGGAGFPTGLKWEFTYKASADQKYVLCNADEGEPGTFKDRLIMEGDPHSLIEGMIIAGYAVGATKGYIYIRGEYHSSIEILKKAVEQAYEYGFLGENILGSGFNFDLKIRLGAGAYVAGEETALIESIEGKPARPRLKPPYPPTFGLFGKPTVVNNVETFVNVPRIIMNGAEWFKKFGTESSPGTKVFSLVGNVVRKGIVEVPMGVTVRDLIFKFGGGIEGGRKLKVVQTGGSAGTFIGPDKLDVPLDFDSYAKYGVSLGSGVILVADETHCVVDLALTVMRFFEHESCGKCTPCREGTRMIVNILERISRGEGKKEDLDTLREIARNAGETSFCGLGQSIPVPLLSIVDNFEEEFKAHIGADKCPVGVCEFKKKKEKKKIGVRKP GT:EXON 1|1-545:0| BL:SWS:NREP 2 BL:SWS:REP 26->92|FER2_CLOPA|2e-05|38.8|67/102| BL:SWS:REP 112->525|NUOF2_RHIME|e-108|46.1|414/421| PROS 446->457|PS00645|COMPLEX1_51K_2|PDOC00555| SEG 290->302|kparprlkppypp| SEG 311->322|tvvnnvetfvnv| SEG 532->539|kkkkekkk| BL:PDB:NREP 2 BL:PDB:REP 18->92|1m2bA|2e-04|34.7|75/101| BL:PDB:REP 111->526|3i9v1|2e-92|41.6|413/437| RP:PDB:NREP 1 RP:PDB:REP 1->80|2auvA|4e-06|21.8|78/85| RP:PFM:NREP 2 RP:PFM:REP 152->310|PF01512|1e-48|63.5|148/162|Complex1_51K| RP:PFM:REP 434->478|PF10589|1e-13|60.0|45/46|NADH_4Fe-4S| HM:PFM:NREP 3 HM:PFM:REP 152->324|PF01512|2.1e-56|49.7|151/151|Complex1_51K| HM:PFM:REP 433->478|PF10589|1.2e-23|54.3|46/46|NADH_4Fe-4S| HM:PFM:REP 346->392|PF10531|1.9e-11|40.4|47/59|SLBB| GO:PFM:NREP 4 GO:PFM GO:0010181|"GO:FMN binding"|PF01512|IPR011538| GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF01512|IPR011538| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF01512|IPR011538| GO:PFM GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|PF01512|IPR011538| RP:SCP:NREP 4 RP:SCP:REP 5->99|1f37A|3e-13|26.3|95/109|c.47.1.11| RP:SCP:REP 108->343|2fug12|3e-85|47.5|236/243|c.142.1.1| RP:SCP:REP 345->428|2fug13|8e-17|31.7|82/84|d.15.13.1| RP:SCP:REP 431->529|2fug11|5e-17|34.7|98/105|a.29.12.1| HM:SCP:REP 1->100|1f37A_|2.2e-14|28.0|100/109|c.47.1.11|1/1|Thioredoxin-like| HM:SCP:REP 103->344|2fug12|2.1e-97|59.1|242/0|c.142.1.1|1/1|Nqo1 FMN-binding domain-like| HM:SCP:REP 345->428|2fug13|2.5e-22|46.3|82/0|d.15.13.1|1/1|Nqo1 middle domain-like| HM:SCP:REP 429->532|2fug11|9.7e-36|46.2|104/0|a.29.12.1|1/1|Nqo1C-terminal domain-like| OP:NHOMO 1129 OP:NHOMOORG 736 OP:PATTERN ------------------------1---11----1---------1--1----------1-1------- 11222---------12211-12--23111111322211111221-1--1-----1-----11111123411--------112-11112--1--1-----1-11--21111--------------1-----1---1-22222333111111111--11------11--11--------------11111331--------------------------------------------------------------1---------------------------------------------------------------------145-224424441212111----2-21231-23113436331311121--3--111111111233221134333411111111111-33333433221122223332223333112222333322311111111322-23111111111111111111111111111111121221-22112222222222222222222222223344422331331222223323321222131111111113232132-2-1-13-----343253385111111641--1----------------11-1111112---2---1-------------1----21--221111111111111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111111114-121---1-1---------11111111111-1111221122222-1111111111111--------------111111111111111112111111--------1-1-------------------------3223333333221 ----111-211-11111111111111111121111111121111111111111111111111111----1--211------1111111-12111111111111112-1-1115221-111-111111113B1-112--1111111-111-11-11-11111111111411311111111H1112121341111131111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 512 STR:RPRED 93.9 SQ:SECSTR cccccEEccccHHHHTTTHHHHHHHHHHHHccccccccccccccccccccTTccccEEGGGccccccccccHHHHHHHHcTTTccccGGGEEEEcccTT###########cccTTcTTcTTTTcHHHHHHTTcTHHHHHHHHccHHHHHHHHHTTTcccTTTTcccHHHHHTTcccccccccEEEEEcccccTTcccHHHHHHHcHHHHHHHHHHHHHHHTccEEEEEEcTTcHHHHHHHHHHHHHHHHTTcccTTGGGcccccEEEEEEccccGGGGcHHHHHHHHTTcccccccccccTTTccGGGccEEEEEHHHHHTHHHHHHccHHHHHTccccccccEEEEEEEccccccEEEEEETTccHHHHHHTTTcc##ccccEEEEEccccccccEcHHHHTccccTTTTGGGcccccccEEEEEETTccHHHHHHHHHHHHHHHcccccHHHHTTTTHHHHHHHHHTTTcccHHHHHHHHHHHHHHTTccccTHHHHHHHHHHHHHHHHHHHHHH#HHHTTccc################### PSIPRED cccEEEEEEcccHHHHccHHHHHHHHHHHHHHcccccEEEEEEcccccccccccEEEEEcccEEEccccHHHHHHHHHHHHHccccHHHHcccccccccccccccccccccEEEccccccccccHHHHHHcccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHHccccccHHcccccccEEEEEEccccccccHHHHHHHHHccccccccccccccccccccccccEEccHHHHHHHHHHHHccHHHHHHHccccccccEEEEEEcccccccEEEEEccccHHHHHHHHcccccccccEEEEEEcccccccccHHHccccccHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHccccccccHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccc //