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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35367.1
DDBJ      :             sugar ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  586/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   78->279 2r6gG PDBj 2e-30 38.5 %
:RPS:PDB   170->210 3dhwA PDBj 1e-13 41.5 %
:RPS:SCOP  25->278 2r6gG1  f.58.1.1 * 5e-33 29.9 %
:RPS:PFM   148->224 PF00528 * BPD_transp_1 1e-05 33.8 %
:HMM:PFM   93->277 PF00528 * BPD_transp_1 3.4e-22 24.9 181/185  
:BLT:SWISS 24->279 YURM_BACSU 3e-40 37.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35367.1 GT:GENE AAD35367.1 GT:PRODUCT sugar ABC transporter, permease protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 293700..294545 GB:FROM 293700 GB:TO 294545 GB:DIRECTION + GB:PRODUCT sugar ABC transporter, permease protein GB:NOTE similar to PID:2293416 percent identity: 61.48; identified by sequence similarity; putative GB:PROTEIN_ID AAD35367.1 GB:DB_XREF GI:4980777 LENGTH 281 SQ:AASEQ MMKKILTIVRYILIAICLIFFLFPVYWLVITAFKPSDEWFTMPPRFFPTKPTLANFFGAKETEVFGGTTGSIENIFPYLRNSIVVGVSVALIGTVISALAAYAIARYRVGGPFLAEWIISIRMLPPIVSAVPLYVIFTKLRLINTWWALILSHLVIVVPLGVWLLISFFREIPREIDEAAYVDGATPFQAFFYVVLPLSAPGLAAVAVLSLIQSWGEFLLALVLTNDARAQTLPIFLGRYITGWRVAWGPLSAAGIVTMLPVVVFALVAQRYLIRGLTSER GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 24->279|YURM_BACSU|3e-40|37.1|240/300| TM:NTM 6 TM:REGION 8->30| TM:REGION 75->97| TM:REGION 116->138| TM:REGION 148->170| TM:REGION 190->212| TM:REGION 249->271| SEG 12->23|iliaiclifflf| BL:PDB:NREP 1 BL:PDB:REP 78->279|2r6gG|2e-30|38.5|200/284| RP:PDB:NREP 1 RP:PDB:REP 170->210|3dhwA|1e-13|41.5|41/203| RP:PFM:NREP 1 RP:PFM:REP 148->224|PF00528|1e-05|33.8|77/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 93->277|PF00528|3.4e-22|24.9|181/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 25->278|2r6gG1|5e-33|29.9|251/284|f.58.1.1| OP:NHOMO 3825 OP:NHOMOORG 635 OP:PATTERN 331-422145454552813331-171151-3-------22111-------1---3554222532---- --11i213334-1123344-423349444443266614576437N*b2DIH5QKO12B--878BJ4ERaJ68666GDA2---6----------1--------------1---------------------------9AA88---98331311-12332222212221444--1-----1----EE377FG-953333234443243444TIBB5833455B4A45778777B*111111111111111-1---6421121-22233--11---1-42552325344422666777766664333344443333355---5553G513B3333343534B3111555a-26243E21232-12J--1996J211-------111113-JFE1-1635536699699799J---6--4-1EU--dbbQgbVvslbV86---AKEB89CI96--------4222--14-----------------------------3---2-146439BBA9A53444BBFG555434A8C3235--2258-23343A7AJ11--1--41-------------1-3--122--31111---------222224----------1------------------128---1-1-5----------------------1---------37B92514444444444-44444445444434444435659A122343333333333333361224443--599999999999---------11111-86E2222422----3--1------1---1-33333477733364878----------2344222223254411111111111111---11111-----------17-1--1-----1-1---1---1----8MFC9BTBFC-3- -------------2------------------------------------------------------------------------------------------------------------------------------------------------2----1---------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 201 STR:RPRED 71.5 SQ:SECSTR #############################################################################HHHHHHHHH#HHHHHHHHHHHHHHHHHHHcccTTcHHHHHHHHTTccccccHHHHHHHHHHHHHHTTcHHHHHHHHTTTTHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccT## DISOP:02AL 1-2| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHcHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //